Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 OR5J1P-201ENST00000313544 939 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 RNU4-82P-201ENST00000362443 140 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 SNORA5B-201ENST00000363786 132 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 RNU1-41P-201ENST00000516161 162 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 RNU1-48P-201ENST00000516400 162 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 AC027281.1-201ENST00000574178 758 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 MIR4472-2-201ENST00000582069 67 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 MIR4276-201ENST00000584832 70 ntBASIC3.64□□□□□ -1.83
CHD7Q9P2D1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHD7Q9P2D1 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC006504.1-201ENST00000562493 3666 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 HMGN2P27-201ENST00000427352 270 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 BX119904.3-201ENST00000428194 957 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AL591424.2-201ENST00000617023 128 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AL138885.1-201ENST00000405921 675 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 SETP5-201ENST00000437270 562 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC090602.1-201ENST00000469695 252 ntBASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC3.63□□□□□ -1.83
CHD7Q9P2D1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC000041.1-201ENST00000439655 175 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC005008.1-201ENST00000456151 612 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC135001.1-201ENST00000544546 283 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AL163642.2-201ENST00000604722 1019 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 FTLP6-201ENST00000355274 422 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 SEPT7P8-201ENST00000413308 775 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC109458.1-201ENST00000508858 316 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 RPL7L1P13-201ENST00000511702 739 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 AL137790.1-201ENST00000634283 177 ntBASIC3.62□□□□□ -1.83
CHD7Q9P2D1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CHD7Q9P2D1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AC063979.1-201ENST00000415539 377 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AC105272.1-201ENST00000438604 198 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AC021146.3-201ENST00000511911 260 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 RN7SKP132-201ENST00000516001 208 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AP003122.5-201ENST00000527668 3766 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 MAPRE1P3-201ENST00000435438 796 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 HMGB1P5-202ENST00000451497 985 ntBASIC3.61□□□□□ -1.83
CHD7Q9P2D1 AC112198.1-201ENST00000505369 1220 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms