Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 RANP4-201ENST00000413361 655 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AL357520.1-201ENST00000441557 453 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 RN7SL542P-201ENST00000467147 294 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AC139783.2-201ENST00000504847 1145 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 MTCO1P31-201ENST00000506355 492 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 SAP18P1-201ENST00000512058 390 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 MTCO3P22-201ENST00000603219 784 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 PSMA6P4-201ENST00000603247 718 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AL139395.1-201ENST00000603662 160 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AC233309.1-201ENST00000619522 751 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 AL354798.1-201ENST00000622505 329 ntBASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.83□□□□□ -1.64
HMG20BQ9P0W2 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AL122126.1-201ENST00000546905 1318 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 MIR1251-201ENST00000408552 70 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 RN7SKP159-201ENST00000410657 292 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AL450992.3-201ENST00000413192 568 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 NANOGP6-201ENST00000429190 847 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 RNU6-1218P-201ENST00000458990 108 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 OR9M1P-201ENST00000459641 921 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC091959.2-201ENST00000477363 321 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 RN7SL132P-201ENST00000478131 296 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 GAPDHP36-201ENST00000480688 918 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 PPM1AP1-201ENST00000502740 1135 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC010627.1-201ENST00000503819 1294 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 MTND4LP31-201ENST00000514859 294 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 RNU6-362P-201ENST00000516736 90 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 AL645927.2-201ENST00000618350 349 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 FP236240.3-201ENST00000623061 327 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMG20BQ9P0W2 ZNF962P-201ENST00000443465 3140 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AC114546.3-201ENST00000623582 1734 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 RN7SKP202-201ENST00000410439 330 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 RN7SKP27-201ENST00000410684 333 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 TRGV6-201ENST00000417928 299 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 RRM2P4-201ENST00000441721 562 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 MED28P5-201ENST00000528254 438 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 GNRHR2P1-201ENST00000555315 631 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AC005255.1-201ENST00000593748 216 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AC015726.1-201ENST00000602353 681 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 AL451086.1-201ENST00000605596 223 ntBASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.81□□□□□ -1.64
HMG20BQ9P0W2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms