Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NDE1Q9NXR1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC103591.2-201ENST00000265259 766 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 MIR423-201ENST00000362201 94 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 U8.4-201ENST00000363626 134 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL603865.2-201ENST00000401679 213 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL136131.1-201ENST00000406079 803 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 RNA5SP239-201ENST00000410218 129 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 LINC01347-201ENST00000417964 355 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 CYP4F29P-201ENST00000420685 446 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC022022.1-201ENST00000430304 178 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 ELOCP10-201ENST00000440624 327 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL096803.2-201ENST00000450032 677 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL645939.1-201ENST00000453429 797 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 SBDSP1-204ENST00000453858 737 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 snoU13.20-201ENST00000459180 104 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 snoU109.3-201ENST00000459477 145 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 RPL23AP72-201ENST00000492447 435 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 TRAV31-201ENST00000502780 342 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 OR5M14P-201ENST00000506803 618 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC108120.2-201ENST00000512973 294 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AP000827.1-201ENST00000527814 258 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 OR5BC1P-201ENST00000529327 739 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC118942.1-201ENST00000529674 1035 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 CYB5AP5-201ENST00000549779 389 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC044860.2-201ENST00000561005 179 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC079171.1-201ENST00000568788 914 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 MIR3691-201ENST00000578066 90 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL606834.3-201ENST00000602615 496 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 MRPS35P3-201ENST00000603189 709 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AL049844.2-201ENST00000604280 628 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 ELOCP34-201ENST00000604436 327 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 AC119674.1-212ENST00000641155 993 ntBASIC4.07□□□□□ -1.76
NDE1Q9NXR1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDE1Q9NXR1 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 SDAD1P1-202ENST00000524156 2051 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC010329.2-201ENST00000595195 2737 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC234772.1-201ENST00000377927 937 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RNU6-146P-201ENST00000384602 108 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RNU6-298P-201ENST00000390888 96 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RNU4-34P-201ENST00000410431 124 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RNU6-603P-201ENST00000411403 107 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 MTCO2P8-201ENST00000412213 658 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RPL6P29-201ENST00000414863 865 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC093422.3-201ENST00000428506 305 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 VDAC1P6-201ENST00000430062 855 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AL365396.1-201ENST00000430854 671 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC097499.1-201ENST00000444277 208 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RPL32P9-201ENST00000487963 407 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 TPT1P3-201ENST00000492841 512 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC008427.1-201ENST00000503102 655 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC005798.1-201ENST00000513715 387 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 RNA5SP34-201ENST00000516887 130 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.06□□□□□ -1.76
NDE1Q9NXR1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NDE1Q9NXR1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms