Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC092809.1-201ENST00000441469 474 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 BUD31P2-201ENST00000449374 300 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 PPIAP15-201ENST00000479662 484 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC106872.2-201ENST00000494303 480 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 SEC11B-201ENST00000518383 499 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC107016.1-201ENST00000550463 337 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AL161713.1-201ENST00000555538 145 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 NPM1P47-201ENST00000560843 856 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC027281.1-201ENST00000574178 758 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC068790.5-201ENST00000602741 355 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC115621.1-201ENST00000604653 858 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC023043.4-201ENST00000612081 449 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AC123768.4-201ENST00000616244 701 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AL359715.5-201ENST00000623431 443 ntBASIC3.86□□□□□ -1.79
TREX1Q9NSU2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TREX1Q9NSU2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 MIR372-201ENST00000362225 67 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 RNU6-1251P-201ENST00000364502 107 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 SNORA62-201ENST00000365493 153 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL049693.1-201ENST00000402760 611 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC007064.3-201ENST00000422608 359 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 OR4C10P-201ENST00000434991 931 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC114755.5-201ENST00000447760 831 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC098824.1-201ENST00000453565 980 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 HMGN1P8-201ENST00000463578 288 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 TRBV12-2-201ENST00000489763 344 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC004069.2-201ENST00000505438 1114 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 RNA5SP143-201ENST00000516936 115 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 SUMO2P20-201ENST00000520803 283 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL137849.1-201ENST00000604767 169 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AL592436.1-201ENST00000605135 558 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 AC079684.1-201ENST00000621405 437 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 MIR6500-201ENST00000622700 86 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 NCAPGP1-201ENST00000505112 1814 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 SYT14P1-202ENST00000600441 1448 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 LINC00561-201ENST00000565815 2738 ntBASIC3.85□□□□□ -1.79
TREX1Q9NSU2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TREX1Q9NSU2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 RNU6-213P-201ENST00000384051 104 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 SNORD65-201ENST00000391079 73 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 ATP5F1P4-201ENST00000397288 746 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 HMGB1P32-201ENST00000425971 565 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AL392003.1-201ENST00000434394 243 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AL157884.3-201ENST00000448273 1184 ntBASIC3.84□□□□□ -1.79
TREX1Q9NSU2 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms