Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AL732292.1-201ENST00000426692 226 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 ACTR3P2-201ENST00000439585 1257 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC092809.1-201ENST00000441469 474 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AL512326.1-201ENST00000443050 721 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 RPL23AP81-201ENST00000455252 467 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 SNORD108-201ENST00000459332 71 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 RPS20P4-201ENST00000461659 355 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 RN7SL271P-201ENST00000487601 295 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC025459.1-201ENST00000504072 156 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AL121594.4-201ENST00000556211 1196 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AL133457.1-201ENST00000564251 987 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC00216-201ENST00000623548 1126 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 MFSD8-216ENST00000641147 4009 ntBASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCNB1IP1Q9NPC3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.78□□□□□ -1.81
CCNB1IP1Q9NPC3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC139713.2-214ENST00000642059 1811 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL590290.1-201ENST00000405336 380 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL035696.2-201ENST00000407941 709 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 MIR1183-201ENST00000408856 89 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 FAR2P2-201ENST00000413041 594 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC011933.1-201ENST00000413334 321 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 RANP4-201ENST00000413361 655 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC116533.1-201ENST00000459748 321 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 IGKV2-36-201ENST00000519999 223 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL133247.2-201ENST00000603236 482 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC069304.3-201ENST00000603938 1084 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AL356218.2-201ENST00000605264 187 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC009032.1-201ENST00000617574 431 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 GTF2H2B-203ENST00000508065 1432 ntBASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCNB1IP1Q9NPC3 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 UBE3AP2-201ENST00000429033 2259 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 P2RY10P2-201ENST00000416730 913 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC244453.4-201ENST00000419150 388 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 RPS29P17-201ENST00000430795 166 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC023347.2-201ENST00000433994 462 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 RPL23AP46-201ENST00000438548 490 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 RPL23AP52-201ENST00000439311 478 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC009263.1-201ENST00000441193 1239 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 TPT1P13-201ENST00000449760 499 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AC006463.2-201ENST00000473326 348 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 RPS29P19-201ENST00000479709 171 ntBASIC3.76□□□□□ -1.81
CCNB1IP1Q9NPC3 AL161747.1-201ENST00000480068 358 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms