Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 Y_RNA.67-201ENST00000362870 100 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 RNA5SP85-201ENST00000365378 119 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 RPL7P25-201ENST00000404151 721 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 GPS2P1-201ENST00000411761 986 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC079809.1-201ENST00000415468 276 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 NANOGP6-201ENST00000429190 847 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 HMGB3P9-201ENST00000441799 583 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 RPS18P1-201ENST00000447840 458 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 RNU1-88P-201ENST00000459274 128 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC034159.1-201ENST00000513885 583 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 OR5B19P-201ENST00000531766 928 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC011611.1-201ENST00000552179 197 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC019322.1-201ENST00000571869 389 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AL133255.1-201ENST00000606374 441 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 RNU6-87P-201ENST00000607561 108 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AL161734.1-201ENST00000609720 557 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC024940.5-201ENST00000622889 474 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 C2orf27A-204ENST00000623058 969 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC068213.1-201ENST00000625124 226 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 CKAP2P1-201ENST00000555477 2049 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AC078880.4-201ENST00000617627 1749 ntBASIC5.85□□□□□ -1.47
SSU72Q9NP77 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.85□□□□□ -1.47
SSU72Q9NP77 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSU72Q9NP77 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 LINC00622-201ENST00000562811 1570 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AP001029.2-203ENST00000589795 4910 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 Y_RNA.209-201ENST00000364156 111 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 RNA5SP485-201ENST00000365053 119 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSU72Q9NP77 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 U3.23-201ENST00000391132 200 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 RNU6-952P-201ENST00000391164 108 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 HMGB1P17-201ENST00000403495 628 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL139805.1-201ENST00000407837 289 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC211486.3-201ENST00000412694 621 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL357752.1-201ENST00000412817 349 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC004987.3-201ENST00000413879 771 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 MTCO3P12-201ENST00000416718 547 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL353678.1-201ENST00000422735 741 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AC233981.1-201ENST00000423224 461 ntBASIC5.84□□□□□ -1.47
SSU72Q9NP77 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.84□□□□□ -1.47
SSU72Q9NP77 RIMKLBP2-201ENST00000424737 654 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms