Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SND1-IT1Q9HBX3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 FAM35DP-201ENST00000323387 2712 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC104446.1-201ENST00000613728 1321 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL627171.1-201ENST00000618845 1308 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RNA5SP175-201ENST00000364275 119 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 MIR298-201ENST00000401212 88 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL356057.1-202ENST00000402263 756 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC241520.1-201ENST00000422654 1099 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC096638.2-201ENST00000434965 711 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 FABP5P3-201ENST00000437960 408 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RPL23AP33-201ENST00000442301 452 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 TPT1P13-201ENST00000449760 499 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 MRPL35P4-201ENST00000453682 566 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RPL5P32-201ENST00000454085 879 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC011005.3-201ENST00000491624 395 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC092045.1-201ENST00000495716 1231 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC104164.2-201ENST00000496953 495 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 IGBP1P5-201ENST00000507524 1000 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC005798.1-201ENST00000513715 387 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 MTCO1P30-201ENST00000515244 580 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 OR5M2P-201ENST00000529003 936 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC006064.5-201ENST00000541782 248 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 CBX3P5-201ENST00000552017 521 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC063950.1-201ENST00000552036 308 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC079587.1-201ENST00000603846 277 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL049634.3-201ENST00000604968 457 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 KATNBL1P5-201ENST00000605015 517 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL133243.1-201ENST00000614487 366 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL021997.2-201ENST00000615674 271 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RN7SL722P-201ENST00000617780 284 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RN7SL565P-201ENST00000618246 284 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC017104.5-201ENST00000637647 639 ntBASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SND1-IT1Q9HBX3 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AL353746.1-201ENST00000566293 6881 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 RNA5SP435-201ENST00000364044 108 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 RNA5SP397-201ENST00000391323 118 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 ENSAP1-201ENST00000392855 326 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AC097374.1-203ENST00000400783 485 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 RPL23AP27-201ENST00000415161 451 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AC093422.3-201ENST00000428506 305 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 ETF1P3-201ENST00000430422 1160 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 UBE2V1P1-201ENST00000430836 445 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 CKS1BP5-201ENST00000434172 273 ntBASIC2.79□□□□□ -1.96
SND1-IT1Q9HBX3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms