Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 COX6B1P7-201ENST00000430845 235 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 RPL12P28-201ENST00000430852 489 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AL365396.1-201ENST00000430854 671 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 RPS4XP4-201ENST00000443195 763 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AL162388.1-201ENST00000450912 352 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 RPL35AP28-201ENST00000459730 331 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC099522.1-202ENST00000514718 367 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 RNU6-334P-201ENST00000517072 102 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 HMGB1P46-201ENST00000520062 610 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 C1DP5-201ENST00000525775 383 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC093014.1-201ENST00000548926 724 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC233266.2-201ENST00000567067 528 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AL161729.3-201ENST00000603533 673 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC024940.4-201ENST00000605507 246 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC018754.1-201ENST00000607486 925 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AC027449.1-201ENST00000608890 407 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AL050303.3-201ENST00000613704 284 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 AP000943.4-201ENST00000622912 357 ntBASIC4.85□□□□□ -1.63
UPF2Q9HAU5 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UPF2Q9HAU5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC017002.4-201ENST00000604721 1525 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AL645568.2-201ENST00000432815 1337 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AL139128.1-201ENST00000413921 941 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 RPS29P17-201ENST00000430795 166 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AL606490.7-201ENST00000433136 191 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC093716.1-201ENST00000435923 377 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AP000936.3-201ENST00000438127 255 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 PPIAP17-201ENST00000438507 471 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC245517.2-201ENST00000442890 346 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 RPL23AP24-201ENST00000458203 385 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 RPL7P24-201ENST00000493052 752 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 MTCO3P27-201ENST00000514397 196 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC016550.3-201ENST00000515706 767 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 RN7SKP92-201ENST00000517266 244 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 OR8G5-201ENST00000524943 1041 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC097504.2-201ENST00000608088 454 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 MIR8084-201ENST00000614105 89 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AL645927.2-201ENST00000618350 349 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 AC019080.5-201ENST00000624891 757 ntBASIC4.84□□□□□ -1.63
UPF2Q9HAU5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
UPF2Q9HAU5 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
UPF2Q9HAU5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
UPF2Q9HAU5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.84□□□□□ -1.64
UPF2Q9HAU5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
UPF2Q9HAU5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 USP9YP4-201ENST00000424401 1745 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 AL137100.1-201ENST00000556703 1620 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 SNORA72.3-201ENST00000365074 132 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 ATP5F1P4-201ENST00000397288 746 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 HSPE1P8-201ENST00000406997 288 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 RNU4-27P-201ENST00000410889 139 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 AC069282.1-201ENST00000411911 526 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.83□□□□□ -1.64
UPF2Q9HAU5 AL772161.1-201ENST00000439130 476 ntBASIC4.83□□□□□ -1.64
UPF2Q9HAU5 RNFT1P2-201ENST00000443064 757 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms