Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC107015.1-201ENST00000466902 747 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC105918.1-201ENST00000474399 838 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 UBA52P3-201ENST00000491303 382 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 RNA5SP179-201ENST00000517284 121 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 RN7SL339P-201ENST00000580597 296 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 MIR486-1-201ENST00000612171 68 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC005344.1-201ENST00000613391 459 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC073530.2-201ENST00000623987 261 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC093775.1-201ENST00000624154 1868 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 AC020978.9-201ENST00000624380 1141 ntBASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPAP1Q9BWH6 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 SNORA5A-201ENST00000384111 134 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC093578.1-201ENST00000415219 368 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 USP12PY-201ENST00000427677 1064 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AL133477.1-201ENST00000457472 514 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC069499.1-201ENST00000489433 509 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 BTF3L4P4-201ENST00000506381 449 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 SCARNA14-201ENST00000516903 136 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 IGLVIV-53-201ENST00000520107 367 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 GTF2IP22-201ENST00000554443 182 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 HMGB3P26-201ENST00000560051 582 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC015726.1-201ENST00000602353 681 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AC091167.4-201ENST00000605079 184 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 AL139089.1-201ENST00000620372 975 ntBASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.72□□□□□ -1.65
RPAP1Q9BWH6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
RPAP1Q9BWH6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
RPAP1Q9BWH6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 U1.1-201ENST00000384101 164 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 SNORA9-201ENST00000384215 133 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 MIR30B-201ENST00000384850 88 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 Z97055.1-201ENST00000419730 712 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 HMGB1P37-201ENST00000439613 609 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 CYCSP53-201ENST00000455540 265 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC006499.5-201ENST00000505037 514 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC007991.1-201ENST00000522680 631 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 MTND2P13-201ENST00000577438 1039 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC009303.3-201ENST00000591103 736 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AC009093.8-201ENST00000641769 292 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 AL079305.1-201ENST00000623159 3008 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 ZNF285B-201ENST00000561698 1767 ntBASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.71□□□□□ -1.66
RPAP1Q9BWH6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 MIR199A2-201ENST00000385289 110 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 ATP5HP2-201ENST00000433885 485 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 KCTD9P3-201ENST00000434597 1169 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 snoU13.24-201ENST00000458998 104 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 RPS3AP6-201ENST00000484430 795 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AL049634.3-201ENST00000604968 457 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AP003392.5-201ENST00000607857 415 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AC084757.4-201ENST00000616350 526 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 AP003499.2-201ENST00000624100 483 ntBASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.7□□□□□ -1.66
RPAP1Q9BWH6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms