Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC008033.1-201ENST00000216407 1162 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 OR10J6P-201ENST00000289731 930 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-353P-201ENST00000364266 108 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-259P-201ENST00000383999 107 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RNY3P10-201ENST00000384764 102 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL17P50-201ENST00000396131 546 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 GSTA12P-201ENST00000402398 508 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL139098.1-201ENST00000407291 389 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC138393.2-201ENST00000414742 246 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 GNG5P5-201ENST00000420444 220 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 USP9YP18-201ENST00000425912 695 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ISCA1P1-201ENST00000426679 387 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL19P16-201ENST00000433839 588 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 USP9YP8-201ENST00000441913 500 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL5P13-201ENST00000462840 709 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC097484.1-201ENST00000471148 389 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC037198.2-201ENST00000478845 733 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ARL2BPP4-201ENST00000506854 471 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 TCP11X3P-202ENST00000514289 1254 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SKP66-201ENST00000516681 231 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 MTCO1P40-201ENST00000574371 625 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 EIF1P6-201ENST00000600054 334 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC064836.2-201ENST00000609491 462 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL589743.7-201ENST00000612637 233 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AL122125.1-201ENST00000616999 600 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 U4.5-201ENST00000617137 123 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AP002799.1-201ENST00000623552 423 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC093775.1-201ENST00000624154 1868 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 THAP12P4-201ENST00000528321 2266 ntBASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 OR10AB1P-202ENST00000641219 1686 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC006210.2-201ENST00000367074 1545 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RLIMP2-201ENST00000427891 1563 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC000367.1-201ENST00000452711 1766 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-500P-201ENST00000362349 107 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-181P-201ENST00000363225 107 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU4-12P-201ENST00000365233 139 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR589-201ENST00000385238 99 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 HMGB1P10-201ENST00000395823 563 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AL645927.1-201ENST00000396783 406 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 USP9YP20-201ENST00000419224 558 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL21P32-201ENST00000419877 477 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AL138787.1-202ENST00000437804 898 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND4LP16-201ENST00000440828 295 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC073850.1-201ENST00000449243 255 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SL329P-201ENST00000467740 299 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL7AP6-201ENST00000477943 801 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC008953.1-201ENST00000497334 318 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC091951.2-201ENST00000500762 203 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 HNRNPKP5-201ENST00000515300 253 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-678P-201ENST00000516832 109 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC023632.1-201ENST00000518463 375 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AP002373.2-201ENST00000541631 1060 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR3691-201ENST00000578066 90 ntBASIC5.43□□□□□ -1.54
CDK5RAP1Q96SZ6 AC087763.1-201ENST00000603391 286 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms