Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 MIR7851-201ENST00000610611 160 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC104058.1-201ENST00000448028 297 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 FDX1P2-201ENST00000450769 375 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC018442.3-201ENST00000523025 183 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC010503.3-201ENST00000594355 540 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 HMGN1P24-201ENST00000412282 298 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 RPL7AP73-201ENST00000413490 353 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 NPM1P13-201ENST00000452663 865 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 Y_RNA.676-201ENST00000516393 96 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 AC010149.2-201ENST00000637608 315 ntBASIC3.43□□□□□ -1.86
VPS13AQ96RL7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS13AQ96RL7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 RNA5SP229-201ENST00000410809 99 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 OR5AW1P-201ENST00000426334 1006 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AL035458.1-201ENST00000433096 585 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 YWHAEP4-201ENST00000505390 198 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC010374.2-201ENST00000512933 535 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 GTF3AP2-201ENST00000557014 266 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC008759.1-201ENST00000589783 983 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC105227.2-201ENST00000615075 605 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC069209.1-201ENST00000619282 651 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC138393.1-206ENST00000540997 1886 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 HSPA8P19-201ENST00000505359 1517 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 OR51A6P-201ENST00000418680 1004 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 RPL36AP10-201ENST00000421785 322 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 REREP1Y-201ENST00000422655 198 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 REREP2Y-201ENST00000439103 200 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 S100A11P1-201ENST00000477525 312 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 AC025554.1-201ENST00000505641 188 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.42□□□□□ -1.86
VPS13AQ96RL7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS13AQ96RL7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 RNA5SP247-201ENST00000411181 105 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AC003685.2-201ENST00000422795 395 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AL591473.1-201ENST00000464297 313 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AL359219.2-201ENST00000555184 348 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AL031679.1-201ENST00000400616 525 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 MIR1261-201ENST00000408659 82 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AC091826.1-201ENST00000514065 313 ntBASIC3.41□□□□□ -1.86
VPS13AQ96RL7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13AQ96RL7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms