Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 BX842559.2-201ENST00000451418 605 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 RN7SL447P-201ENST00000494711 245 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC010285.3-201ENST00000511668 676 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 RNA5SP135-201ENST00000517019 125 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 RN7SKP99-201ENST00000517028 307 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC008562.1-201ENST00000521763 330 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AP004607.2-201ENST00000533949 322 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC004217.3-201ENST00000551552 878 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 RN7SL176P-201ENST00000580352 264 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 MIR3611-201ENST00000584484 83 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC022146.1-201ENST00000595307 847 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC133552.5-201ENST00000604266 540 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AL162431.4-201ENST00000604674 411 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AL391497.1-201ENST00000608671 547 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 MIR8080-201ENST00000622224 89 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 PCMTD1P7-201ENST00000634506 357 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 OR5BE1P-202ENST00000641168 1176 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.75□□□□□ -1.65
SNX18Q96RF0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SNX18Q96RF0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SNX18Q96RF0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC104118.1-201ENST00000607625 1589 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AL356473.1-201ENST00000406203 1408 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AL353743.4-201ENST00000422653 1547 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AL672167.1-206ENST00000356293 943 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 RNU5D-1-201ENST00000363299 116 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 U3.4-201ENST00000363352 213 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 RNU6-1066P-201ENST00000363573 105 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 MIR589-201ENST00000385238 99 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 RPS24P12-201ENST00000402084 394 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 RPL7P8-201ENST00000411964 730 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AF274854.1-201ENST00000413236 615 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 RPL35AP24-201ENST00000413846 330 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 RPS25P9-201ENST00000435591 252 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 MTCYBP39-201ENST00000437562 491 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 RPL7P59-201ENST00000447700 943 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 DDX39BP2-208ENST00000453923 258 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 SETP14-201ENST00000497538 873 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC104685.1-201ENST00000502445 371 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC107401.1-201ENST00000503426 685 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC011352.3-201ENST00000505162 593 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC022447.1-201ENST00000515358 464 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC106038.2-201ENST00000520706 568 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC060788.1-201ENST00000521318 469 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 SMARCE1P4-201ENST00000523647 241 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.74□□□□□ -1.65
SNX18Q96RF0 AC022884.2-201ENST00000578535 580 ntBASIC4.74□□□□□ -1.65
SNX18Q96RF0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms