Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 U4.6-201ENST00000621618 127 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC009313.2-201ENST00000417893 1941 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 RNU1-140P-201ENST00000365040 165 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 Z99755.1-201ENST00000414048 380 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC003685.2-201ENST00000422795 395 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 RPL21P112-201ENST00000434403 463 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC005008.1-201ENST00000456151 612 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC087241.4-201ENST00000612441 480 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC015922.4-201ENST00000612568 690 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC138393.1-206ENST00000540997 1886 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 GVINP1-202ENST00000531871 7271 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 MIR504-201ENST00000385065 83 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 VDAC2P1-201ENST00000399358 958 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 UBTFL3-201ENST00000418934 1024 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 UBTFL6-201ENST00000477929 1024 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC010374.2-201ENST00000512933 535 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 Xist_exon4.1-201ENST00000615964 126 ntBASIC3□□□□□ -1.93
CSMD1Q96PZ7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AL645937.1-201ENST00000641739 1652 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 Z95327.2-201ENST00000414579 1873 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC108941.1-201ENST00000502853 530 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 IGHV3-29-201ENST00000604817 344 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AF228730.2-201ENST00000438784 848 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 YWHAEP4-201ENST00000505390 198 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AP000553.6-201ENST00000641242 118 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 LIPT1P1-201ENST00000415870 1186 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 OR6K4P-201ENST00000423179 955 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC104058.1-201ENST00000448028 297 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 AC016839.1-201ENST00000578162 867 ntBASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC2.99□□□□□ -1.93
CSMD1Q96PZ7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 IL6-203ENST00000401651 539 ntTSL 2 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AL031584.1-201ENST00000447169 754 ntBASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 OR2A20P-203ENST00000498397 1268 ntBASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CSMD1Q96PZ7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms