Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 RNA5SP130-201ENST00000364431 114 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 RNU6-891P-201ENST00000384280 111 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 RNU6-532P-201ENST00000384318 107 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 ENSAP1-201ENST00000392855 326 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 OR8G2P-201ENST00000412796 908 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AL117339.2-201ENST00000430475 180 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 FABP3P2-201ENST00000453169 399 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 RPL5P32-201ENST00000454085 879 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC005912.1-201ENST00000495392 255 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 SNORD116-26-201ENST00000516006 96 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC106785.1-201ENST00000565935 262 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AGGF1P6-201ENST00000569213 976 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC093227.2-201ENST00000589357 285 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 RNU4-89P-201ENST00000607443 133 ntBASIC4.05□□□□□ -1.76
C9orf72Q96LT7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
C9orf72Q96LT7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 RNU6-618P-201ENST00000363518 112 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 RNU1-64P-201ENST00000365443 163 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 RNA5SP283-201ENST00000365604 119 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 HMGB3P19-201ENST00000403971 560 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC006326.1-201ENST00000445465 787 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC092691.2-201ENST00000461787 803 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 CDH12P2-201ENST00000504393 298 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC067904.2-201ENST00000517322 1283 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 RFPL1S-203ENST00000539579 330 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 NPM1P47-201ENST00000560843 856 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 HMGB1P51-201ENST00000605166 638 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 AC095050.2-201ENST00000510748 1458 ntBASIC4.04□□□□□ -1.76
C9orf72Q96LT7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
C9orf72Q96LT7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AL031985.3-201ENST00000565390 2449 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 SPATA2P1-201ENST00000431223 2055 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 SNORA60-201ENST00000362396 134 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 RNU1-18P-201ENST00000363062 164 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 RN7SKP280-201ENST00000364196 304 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 MIR320B1-201ENST00000390209 79 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AL138785.1-201ENST00000425821 331 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.03□□□□□ -1.76
C9orf72Q96LT7 HMGB1P37-201ENST00000439613 609 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 VN1R48P-201ENST00000448149 1036 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 RPS17P13-201ENST00000448974 407 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 RPL7P31-201ENST00000450192 724 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AC005229.2-201ENST00000456995 399 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 RN7SL93P-201ENST00000463035 293 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 RN7SL604P-201ENST00000492589 296 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AC108064.1-201ENST00000513791 460 ntBASIC4.03□□□□□ -1.76
C9orf72Q96LT7 AC117525.1-201ENST00000515228 503 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms