Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.21□□□□□ -1.26
TRIM47Q96LD4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC073343.1-201ENST00000328239 651 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 Y_RNA.187-201ENST00000363918 113 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AL035660.1-201ENST00000422041 222 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AL606753.1-201ENST00000427435 87 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 YWHAEP5-201ENST00000431545 765 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AL359672.1-201ENST00000442302 409 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC005077.1-201ENST00000449226 375 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 RPL17P2-201ENST00000491913 451 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC018797.3-201ENST00000513388 1241 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 RNA5SP401-201ENST00000515920 127 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 RNU6-635P-201ENST00000516651 102 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 RNU6-943P-201ENST00000516960 98 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 IGHV1-14-201ENST00000523391 241 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AP005639.1-201ENST00000526939 192 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AP000827.1-201ENST00000527814 258 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC024224.1-201ENST00000538284 609 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 RRN3P3-201ENST00000549207 578 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC124068.1-201ENST00000563131 678 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC083806.3-201ENST00000614016 455 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 U2.1-201ENST00000618978 145 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC233309.1-201ENST00000619522 751 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AC132825.8-201ENST00000640783 297 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 AF287957.1-201ENST00000607368 1595 ntBASIC7.2□□□□□ -1.26
TRIM47Q96LD4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM47Q96LD4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AC012618.3-205ENST00000637896 1496 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 RNU1-150P-201ENST00000362491 162 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 RNU5D-1-201ENST00000363299 116 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 RNU6-533P-201ENST00000384144 107 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 Y_RNA.527-201ENST00000384573 102 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AL356968.1-201ENST00000416622 474 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 BX323845.3-201ENST00000428215 527 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 ARL5AP4-201ENST00000430731 512 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AC012181.1-201ENST00000479895 423 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 AC091965.3-201ENST00000506236 208 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 SCARNA18.1-201ENST00000516330 83 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 RNU6-445P-201ENST00000516949 107 ntBASIC7.19□□□□□ -1.26
TRIM47Q96LD4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM47Q96LD4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms