Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HPS3Q969F9 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.4□□□□□ -1.54
HPS3Q969F9 UBA52P3-201ENST00000491303 382 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 RPL5P23-201ENST00000496040 868 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 AC104090.1-201ENST00000506341 1171 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.4□□□□□ -1.54
HPS3Q969F9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.4□□□□□ -1.54
HPS3Q969F9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC022069.1-201ENST00000582910 658 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.4□□□□□ -1.54
HPS3Q969F9 AC006539.2-201ENST00000601729 572 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 AC133552.5-201ENST00000604266 540 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 AL592221.1-201ENST00000605266 382 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HPS3Q969F9 AP003072.4-201ENST00000624580 310 ntBASIC5.4□□□□□ -1.54
HPS3Q969F9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
HPS3Q969F9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HPS3Q969F9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.4□□□□□ -1.55
HPS3Q969F9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HPS3Q969F9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HPS3Q969F9 ZNF652P1-201ENST00000442420 1309 ntBASIC5.4□□□□□ -1.55
HPS3Q969F9 HSPA8P18-201ENST00000439846 1928 ntBASIC5.4□□□□□ -1.55
HPS3Q969F9 AC099654.2-201ENST00000433031 1980 ntBASIC5.4□□□□□ -1.55
HPS3Q969F9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HPS3Q969F9 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HPS3Q969F9 SALL4P2-201ENST00000423288 2910 ntBASIC5.4□□□□□ -1.55
HPS3Q969F9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.4□□□□□ -1.55
HPS3Q969F9 AL672167.1-203ENST00000641299 2975 ntBASIC5.4□□□□□ -1.55
HPS3Q969F9 AC000374.1-201ENST00000434698 1745 ntBASIC5.4□□□□□ -1.55
HPS3Q969F9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.39□□□□□ -1.55
HPS3Q969F9 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HPS3Q969F9 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.39□□□□□ -1.55
HPS3Q969F9 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 AL445437.1-201ENST00000623157 3087 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC008549.2-201ENST00000333482 706 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 RNA5SP305-201ENST00000362665 119 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 RNU5D-1-201ENST00000363299 116 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 RNU6-115P-201ENST00000364310 107 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 Y_RNA.311-201ENST00000365068 96 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HPS3Q969F9 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS3Q969F9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 PRELID3BP11-201ENST00000414230 479 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS3Q969F9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS3Q969F9 OR2AM1P-201ENST00000422137 422 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC233981.1-201ENST00000423224 461 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AL365203.2-201ENST00000423444 196 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 OR2AH1P-201ENST00000425717 928 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AL513175.1-201ENST00000431492 780 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 RAB11AP1-201ENST00000442978 646 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC010733.1-201ENST00000451515 401 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 NDUFA5P7-201ENST00000452914 242 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 SETP14-201ENST00000497538 873 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC117522.2-201ENST00000510049 657 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 MTND1P22-201ENST00000510572 951 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 MTCO1P30-201ENST00000515244 580 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 RNA5SP249-201ENST00000516127 99 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 OR5AZ1P-201ENST00000527448 943 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.39□□□□□ -1.55
HPS3Q969F9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.39□□□□□ -1.55
HPS3Q969F9 TVP23CP2-201ENST00000571473 623 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC106791.2-201ENST00000604680 391 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC096553.1-201ENST00000605169 829 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC024940.4-201ENST00000605507 246 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AL354760.1-201ENST00000608357 643 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.39□□□□□ -1.55
HPS3Q969F9 EIF3FP1-201ENST00000613970 806 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AC123768.4-201ENST00000616244 701 ntBASIC5.39□□□□□ -1.55
HPS3Q969F9 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.39□□□□□ -1.55
HPS3Q969F9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.39□□□□□ -1.55
HPS3Q969F9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HPS3Q969F9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HPS3Q969F9 AC025125.1-201ENST00000624743 1922 ntBASIC5.38□□□□□ -1.55
HPS3Q969F9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms