Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HMGB3P18-201ENST00000406327 590 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 KRR1P1-201ENST00000419430 803 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 RPL7P57-201ENST00000423238 740 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 RPL23AP4-201ENST00000427757 463 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 FO393419.3-201ENST00000428741 282 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC022022.1-201ENST00000430304 178 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 FHP1-201ENST00000442741 703 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 RPL23AP24-201ENST00000458203 385 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC096992.1-201ENST00000459808 709 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 RPL6P9-201ENST00000466502 859 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC011276.1-201ENST00000469688 323 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC007537.2-201ENST00000472093 511 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 UBA52P3-201ENST00000491303 382 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 RPL36AP41-201ENST00000493820 306 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC098799.3-201ENST00000506095 438 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.29□□□□□ -1.72
TM9SF4Q92544 FKBP1BP1-201ENST00000553366 325 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AL109741.3-201ENST00000561748 592 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 AP002906.1-201ENST00000603405 233 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AL121890.3-201ENST00000618494 516 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AL592182.3-201ENST00000642132 3304 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 AC025031.4-201ENST00000621248 3271 ntBASIC4.29□□□□□ -1.72
TM9SF4Q92544 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM9SF4Q92544 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC017104.4-201ENST00000636283 1592 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 RAD17P1-201ENST00000418130 2042 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 RPS27AP11-201ENST00000402798 447 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 LAP3P1-201ENST00000403648 294 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 HMGB1P13-201ENST00000406019 642 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 EIF4A1P3-201ENST00000411521 244 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 MTCO2P21-201ENST00000419780 677 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 Z74021.1-201ENST00000423610 407 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 RPEP3-201ENST00000425462 676 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC234779.1-201ENST00000425910 285 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 VN1R25P-201ENST00000443385 738 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 SEPT14P24-201ENST00000447236 180 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 Z73417.1-201ENST00000447373 778 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC104651.2-201ENST00000447549 528 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 OR51B8P-201ENST00000449892 769 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 NAP1L1P3-201ENST00000462291 880 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC015912.2-201ENST00000571053 181 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC008751.2-201ENST00000597885 980 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC113368.1-201ENST00000603736 382 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC090948.1-201ENST00000607464 549 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 AL158196.1-201ENST00000616786 434 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 AC073569.3-201ENST00000619055 682 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.28□□□□□ -1.72
TM9SF4Q92544 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TM9SF4Q92544 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.28□□□□□ -1.72
TM9SF4Q92544 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.73
TM9SF4Q92544 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.27□□□□□ -1.73
TM9SF4Q92544 AC010329.2-201ENST00000595195 2737 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms