Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 MIR4284-201ENST00000578924 81 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC114781.5-201ENST00000615297 108 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AL445437.1-201ENST00000623157 3087 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC024023.1-201ENST00000624530 922 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC008013.2-202ENST00000637965 364 ntBASIC3.74□□□□□ -1.81
SKA3Q8IX90 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SKA3Q8IX90 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.74□□□□□ -1.81
SKA3Q8IX90 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 RNU1-87P-201ENST00000363727 170 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 MIR142-201ENST00000384835 87 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 RNU6-796P-201ENST00000391086 107 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 HMGB1P13-201ENST00000406019 642 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 RNU4-25P-201ENST00000410569 230 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AL365396.1-201ENST00000430854 671 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 PRELID3BP10-201ENST00000431957 584 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC092013.1-201ENST00000438795 332 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 RPL23AP12-201ENST00000467573 473 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 RN7SL691P-201ENST00000494487 301 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 NIPA2P2-201ENST00000496376 1083 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC106806.2-201ENST00000509365 500 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 RNA5SP519-201ENST00000516480 119 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AP003049.1-201ENST00000529418 457 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 TVP23BP1-201ENST00000557500 617 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AF230666.2-201ENST00000602328 725 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC119501.1-201ENST00000603646 475 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC055764.2-201ENST00000610089 670 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 AC015726.3-201ENST00000624501 418 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 MARK2P15-201ENST00000432204 2186 ntBASIC3.73□□□□□ -1.81
SKA3Q8IX90 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.73□□□□□ -1.81
SKA3Q8IX90 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SKA3Q8IX90 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AL592437.2-201ENST00000421655 2434 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC007529.1-201ENST00000418574 2178 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 GTF2H2B-203ENST00000508065 1432 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 RNA5SP366-201ENST00000365454 123 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 PTGES3P2-201ENST00000407942 482 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 RHEBP3-201ENST00000411920 351 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC016712.1-201ENST00000431088 378 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 ACTR3P2-201ENST00000439585 1257 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AL645939.1-201ENST00000453429 797 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC041039.1-201ENST00000485656 536 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC020593.1-201ENST00000507399 299 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC008958.1-201ENST00000511047 682 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 KCTD9P2-201ENST00000512203 1013 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC027338.1-201ENST00000514840 825 ntBASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SKA3Q8IX90 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms