Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PRMT5P1-201ENST00000514351 598 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RNU6-699P-201ENST00000517081 110 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC008562.1-201ENST00000521763 330 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC007068.2-201ENST00000543168 395 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC092375.1-201ENST00000550410 637 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC018552.3-201ENST00000567416 561 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC004232.1-201ENST00000571388 208 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 RPS4XP21-201ENST00000603814 750 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AL355297.3-201ENST00000604082 446 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AL008729.2-201ENST00000606393 473 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 PISRT1.1-201ENST00000616930 107 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 MIR6849-201ENST00000618543 69 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 AC015967.1-201ENST00000619893 476 ntBASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC7.09□□□□□ -1.27
SCUBE3Q8IX30 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
SCUBE3Q8IX30 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.09□□□□□ -1.28
SCUBE3Q8IX30 AL596244.1-201ENST00000567068 3779 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AL049634.1-201ENST00000453770 1720 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 Y_RNA.22-201ENST00000362492 102 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 SNORD3E-201ENST00000362899 217 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RNU6-490P-201ENST00000362985 107 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RNU6-984P-201ENST00000363236 109 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RNA5SP382-201ENST00000363355 112 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RNU1-115P-201ENST00000365329 160 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RHOT1P2-201ENST00000366423 333 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RNU6-328P-201ENST00000390887 106 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AL590635.1-201ENST00000406314 586 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 MIR1266-201ENST00000408125 84 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC048351.1-201ENST00000420064 602 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AL139184.1-202ENST00000422303 222 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AL034379.1-201ENST00000423216 253 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC139712.2-201ENST00000424302 339 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC073069.1-201ENST00000428657 441 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 MTND5P15-201ENST00000434246 349 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 DYNLT3P2-201ENST00000442517 295 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 MED28P3-201ENST00000444288 531 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 OSTCP8-201ENST00000445117 448 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AP003385.3-201ENST00000472498 287 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RN7SL705P-201ENST00000481678 294 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 RN7SL561P-201ENST00000488553 281 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC109481.1-201ENST00000509173 282 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC012400.1-201ENST00000518452 381 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 ASB8-207ENST00000536953 923 ntTSL 2 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 MIR3128-201ENST00000581957 66 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 SNORD39.3-201ENST00000584451 71 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AL353997.4-201ENST00000586196 166 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AL355488.2-201ENST00000609909 2850 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 MTND5P7-201ENST00000413558 1798 ntBASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SCUBE3Q8IX30 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SCUBE3Q8IX30 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms