Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 OR7K1P-201ENST00000546439 926 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 OR4K7P-201ENST00000580232 945 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC015871.2-201ENST00000603605 948 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AL022154.1-201ENST00000604698 785 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC012557.1-201ENST00000607115 611 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC090970.3-201ENST00000612566 866 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AP004607.9-201ENST00000618202 316 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC004009.2-201ENST00000623016 728 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 AC099654.5-201ENST00000636479 350 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 AF001550.2-201ENST00000636643 217 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 TRIM51GP-201ENST00000534741 1350 ntBASIC5.01□□□□□ -1.61
VRK3Q8IV63 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.01□□□□□ -1.61
VRK3Q8IV63 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VRK3Q8IV63 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC109780.1-201ENST00000451768 1344 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 BMPR1APS1-201ENST00000403332 1598 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 MAPK10-328ENST00000641553 4009 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 METTL21EP-201ENST00000298105 713 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5□□□□□ -1.61
VRK3Q8IV63 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
VRK3Q8IV63 FGF7P2-201ENST00000332473 296 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 Y_RNA.70-201ENST00000362886 110 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 RNU4-76P-201ENST00000364509 141 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 SNORA2.3-201ENST00000383920 135 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 Y_RNA.554-201ENST00000384672 102 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AC007068.1-201ENST00000396690 844 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 FGF7P8-201ENST00000402994 292 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5□□□□□ -1.61
VRK3Q8IV63 HMGB3P18-201ENST00000406327 590 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 HMGN1P14-201ENST00000412459 517 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AL109913.1-201ENST00000421173 514 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AC009480.2-201ENST00000422916 432 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 OR8F1P-201ENST00000425243 930 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 RWDD4P2-201ENST00000426392 563 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5□□□□□ -1.61
VRK3Q8IV63 CDY14P-201ENST00000431260 1014 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 RHOT1P3-201ENST00000436571 331 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 MTCO3P18-201ENST00000440206 761 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 YWHAZP2-201ENST00000440317 728 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 RPL34P20-201ENST00000442771 351 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AL163193.1-201ENST00000444895 788 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 COX6CP12-201ENST00000446748 202 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 CDY23P-201ENST00000451661 1014 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC092001.1-201ENST00000453012 261 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC074386.1-201ENST00000476560 767 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 TMED11P-201ENST00000479478 690 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 RPL23AP37-201ENST00000479658 549 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 ACTG1P13-201ENST00000486987 1043 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 Y_RNA.702-201ENST00000516843 96 ntBASIC5□□□□□ -1.61
VRK3Q8IV63 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 CA1-215ENST00000522389 551 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5□□□□□ -1.61
VRK3Q8IV63 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 NTS-203ENST00000551529 801 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5□□□□□ -1.61
VRK3Q8IV63 VN1R92P-201ENST00000598511 928 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 322.7 ms