Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL138960.1-201ENST00000613838 513 ntBASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
UBE3DQ7Z6J8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 OR10R3P-201ENST00000361688 942 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 Y_RNA.315-201ENST00000365117 102 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-510P-201ENST00000391239 108 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 BTBD10P2-201ENST00000404779 676 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RNA5SP431-201ENST00000410312 120 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RPL35AP3-201ENST00000414680 288 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC234782.4-201ENST00000417646 1048 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RPL35AP12-201ENST00000425362 338 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 OR2B7P-201ENST00000429302 934 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RPL5P25-201ENST00000441148 775 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 USP9YP15-201ENST00000442391 422 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AL121877.1-201ENST00000453704 622 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC090142.1-201ENST00000465776 462 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RPL31P50-201ENST00000471002 296 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RPS15AP36-201ENST00000492022 382 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-277P-201ENST00000516272 106 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC084121.1-201ENST00000533882 835 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AL845552.1-201ENST00000556820 323 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC092332.1-201ENST00000563684 829 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC007151.1-201ENST00000572774 483 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AP005119.1-201ENST00000580956 292 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 RPL26P30-202ENST00000602923 645 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AL133255.1-201ENST00000606374 441 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 FAM27E2-201ENST00000619668 403 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AL591926.1-201ENST00000620542 217 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC015871.5-202ENST00000623252 701 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 TPTEP1-208ENST00000636884 213 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC008627.1-201ENST00000517511 1704 ntBASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UBE3DQ7Z6J8 AC022164.1-201ENST00000568767 2673 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AC104966.1-201ENST00000467010 1464 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-1097P-201ENST00000363586 107 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 RNU1-65P-201ENST00000363919 148 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-108P-201ENST00000365558 107 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-456P-201ENST00000384493 107 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 RNU6-952P-201ENST00000391164 108 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AL356967.1-201ENST00000406305 431 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 RN7SKP240-201ENST00000410583 375 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 MTCO3P12-201ENST00000416718 547 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AC009161.1-201ENST00000417306 376 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AC013429.2-201ENST00000418798 781 ntBASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.72□□□□□ -1.49
UBE3DQ7Z6J8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 283.8 ms