Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC140479.3-201ENST00000418944 1126 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 FABP7P1-201ENST00000424004 391 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AL592437.1-201ENST00000443781 492 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 TPT1P13-201ENST00000449760 499 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC233982.1-201ENST00000451247 436 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 BX276092.4-201ENST00000452056 248 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 snoU13.7-201ENST00000459220 104 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC010326.1-201ENST00000462726 602 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC087385.1-201ENST00000475062 312 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC007016.1-201ENST00000512110 244 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC093755.1-201ENST00000512950 1023 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 FTH1P9-201ENST00000513251 355 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MTND1P6-201ENST00000523621 946 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 BNIP3P40-201ENST00000596017 556 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 VN1R88P-201ENST00000596787 292 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC091488.1-201ENST00000604239 660 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC016597.2-201ENST00000613256 341 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MIR6780A-201ENST00000615089 68 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AL590396.4-201ENST00000636779 956 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC139713.2-210ENST00000641741 992 ntBASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NUP54Q7Z3B4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC095050.2-201ENST00000510748 1458 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC012618.3-205ENST00000637896 1496 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL590240.1-201ENST00000334118 313 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RNU5E-10P-201ENST00000363506 118 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RNU6-549P-201ENST00000384433 107 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RPL7P27-201ENST00000403775 720 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC092638.1-201ENST00000411966 1275 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 LIPT1P1-201ENST00000415870 1186 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 UBE2V1P5-201ENST00000440070 405 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 Z80107.2-201ENST00000445127 392 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL929288.2-201ENST00000446368 407 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL513533.1-201ENST00000453728 415 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AP000873.1-201ENST00000463987 400 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RPL5P23-201ENST00000496040 868 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC023141.12-201ENST00000512399 199 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC119751.1-201ENST00000513357 765 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RNU4-60P-201ENST00000517239 135 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 MTND2P26-201ENST00000528255 1029 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AL353600.1-201ENST00000608148 251 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC121761.2-201ENST00000617300 689 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 AC010608.3-201ENST00000625048 527 ntBASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP54Q7Z3B4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms