Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 PPIAP3-201ENST00000450588 505 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCXQ7RTU7 HMGN2P7-201ENST00000456186 273 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 RPL5P23-201ENST00000496040 868 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 SUMO1P1-201ENST00000497904 306 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC093824.1-201ENST00000508796 343 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 MTCO1P30-201ENST00000515244 580 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AP003730.1-201ENST00000524605 285 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC084824.1-201ENST00000550917 1005 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AGGF1P8-201ENST00000562979 1000 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 MIR4644-201ENST00000579929 84 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC091178.1-203ENST00000584586 279 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 OR1AB1P-201ENST00000585564 761 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC008759.1-201ENST00000589783 983 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC007687.1-201ENST00000602704 304 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC023762.1-201ENST00000603280 584 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC024941.1-201ENST00000612250 334 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 AC121761.2-201ENST00000617300 689 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCXQ7RTU7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCXQ7RTU7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCXQ7RTU7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SCXQ7RTU7 ZNF33CP-201ENST00000432492 2030 ntBASIC2.8□□□□□ -1.96
SCXQ7RTU7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 OR56B2P-201ENST00000317102 954 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 RNU1-132P-201ENST00000364300 164 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 HMGB1P10-201ENST00000395823 563 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AL022722.2-201ENST00000402519 180 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 ZNF603P-201ENST00000405613 487 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 AL445528.1-201ENST00000426330 420 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC008065.1-201ENST00000428525 348 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC023347.2-201ENST00000433994 462 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 MRPS33P4-201ENST00000434892 317 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 RPL23AP52-201ENST00000439311 478 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 AP002345.1-201ENST00000456493 928 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC090013.1-201ENST00000485147 480 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC041039.1-201ENST00000485656 536 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 OR52A4P-203ENST00000498233 1014 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 HMGB1P47-201ENST00000511281 589 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 NDUFB4P9-201ENST00000511646 388 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 IGKV2-36-201ENST00000519999 223 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 TVP23BP1-201ENST00000557500 617 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 MIR1254-2-201ENST00000579553 63 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AP001542.1-201ENST00000591314 200 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AL591034.3-201ENST00000605511 685 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 RNA5SP108-201ENST00000605921 117 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 AL031666.3-201ENST00000609320 1006 ntBASIC2.79□□□□□ -1.96
SCXQ7RTU7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms