Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 MTCYBP42-201ENST00000444653 1130 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC092324.1-201ENST00000468671 324 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC007686.1-201ENST00000488511 463 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC091951.3-201ENST00000504093 246 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 MRPS33P2-201ENST00000507850 322 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 COX6B1P5-201ENST00000509843 249 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 RNA5SP360-201ENST00000516555 118 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 HIGD1AP5-201ENST00000529959 259 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 DEFB130C-202ENST00000530001 230 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 DUXAP6-201ENST00000553858 601 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 NMNAT1P1-201ENST00000554095 876 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 ELOCP28-201ENST00000590044 317 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC008687.2-201ENST00000597865 520 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL020997.3-201ENST00000602843 359 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC009237.15-201ENST00000610252 501 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 MIR6864-201ENST00000617935 70 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC015871.5-202ENST00000623252 701 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 MTND4P10-201ENST00000446199 1363 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL731566.1-201ENST00000620490 1937 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 OR1L1-202ENST00000373686 1083 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 SNORD116-8-201ENST00000384365 95 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL078599.1-201ENST00000402075 293 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 GSTA8P-201ENST00000404253 637 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC004987.3-201ENST00000413879 771 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 USP9YP11-201ENST00000427537 717 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL137845.2-201ENST00000444292 988 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 PTENP1-201ENST00000447117 1215 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC000111.2-201ENST00000448200 210 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 PRDX3P4-201ENST00000470828 747 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 RN7SL319P-201ENST00000480656 221 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC010486.2-201ENST00000505572 483 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 snoZ278.1-201ENST00000517059 112 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 GCSHP4-201ENST00000538792 439 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC009117.1-201ENST00000563948 554 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL353778.1-201ENST00000603149 408 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AC064807.4-201ENST00000607201 407 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AL022401.1-201ENST00000619498 108 ntBASIC5.53□□□□□ -1.52
LONRF3Q496Y0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.53□□□□□ -1.52
LONRF3Q496Y0 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms