Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AL356276.2-201ENST00000435919 558 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC073143.1-201ENST00000436316 395 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 HMGB1P37-201ENST00000439613 609 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RNF2P1-201ENST00000442955 1010 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 MTCYBP21-201ENST00000443300 1113 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX1Q15475 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX1Q15475 RPL7L1P1-201ENST00000448259 785 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RPS11P1-201ENST00000451072 473 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 HMGB1P5-202ENST00000451497 985 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 CLIC4P1-201ENST00000453177 535 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RN7SL93P-201ENST00000463035 293 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RPL32P14-201ENST00000463196 378 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC107015.1-201ENST00000466902 747 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RN7SL303P-201ENST00000469773 251 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC068587.1-201ENST00000483613 781 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC091167.1-201ENST00000492017 396 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC026979.1-201ENST00000492525 396 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RPS27AP13-201ENST00000498403 237 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 PPM1AP1-201ENST00000502740 1135 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX1Q15475 RPS27AP18-201ENST00000515536 459 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RNU6-1308P-201ENST00000516817 103 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX1Q15475 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX1Q15475 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.12□□□□□ -1.75
SIX1Q15475 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX1Q15475 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX1Q15475 AC110743.1-201ENST00000584870 478 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC105148.1-201ENST00000604961 409 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC018926.1-201ENST00000616335 435 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC011944.2-201ENST00000624440 683 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 MIR3653-201ENST00000625572 110 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX1Q15475 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX1Q15475 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX1Q15475 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SIX1Q15475 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 CCT8P1-201ENST00000413611 1657 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SIX1Q15475 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.11□□□□□ -1.75
SIX1Q15475 MIR16-2-201ENST00000362117 81 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 SNORA60-201ENST00000362396 134 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 RNU1-18P-201ENST00000363062 164 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 SNORA70.2-201ENST00000364506 135 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SIX1Q15475 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 HMGB1P10-201ENST00000395823 563 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 AL049693.1-201ENST00000402760 611 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 MIR1251-201ENST00000408552 70 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 RNU2-17P-201ENST00000410290 190 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 HSPE1P12-201ENST00000412576 301 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AL592293.2-201ENST00000422292 996 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX1Q15475 MRPL50P1-201ENST00000431951 384 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX1Q15475 EIF2S2P2-201ENST00000447161 982 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AC107398.1-201ENST00000486904 505 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 CAB39P1-201ENST00000502277 460 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.11□□□□□ -1.75
SIX1Q15475 CDH12P2-201ENST00000504393 298 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX1Q15475 AC121161.1-201ENST00000510606 652 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AC087369.1-201ENST00000520775 996 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 YPEL5P3-201ENST00000547227 352 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX1Q15475 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.11□□□□□ -1.75
SIX1Q15475 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
SIX1Q15475 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 AC124856.1-201ENST00000600819 896 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AC112503.2-201ENST00000609005 552 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 MIR6868-201ENST00000611215 58 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AL356274.1-201ENST00000617064 410 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 AC067931.1-201ENST00000624190 671 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SIX1Q15475 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 Z82217.1-201ENST00000625157 8149 ntBASIC4.11□□□□□ -1.75
SIX1Q15475 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SIX1Q15475 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.11□□□□□ -1.75
SIX1Q15475 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 MTND5P11-201ENST00000511037 1812 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms