Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK3Q00526 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK3Q00526 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK3Q00526 AP001207.2-201ENST00000519490 539 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK3Q00526 AL049838.1-201ENST00000563647 981 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK3Q00526 AC023575.1-201ENST00000580510 358 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK3Q00526 KPNA2P3-201ENST00000584190 848 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK3Q00526 AP002360.3-201ENST00000607673 710 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AC097505.1-201ENST00000610199 565 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AC005962.2-201ENST00000611427 652 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 DUXAP10-204ENST00000612052 616 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK3Q00526 AC023510.2-201ENST00000622162 746 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AC104985.3-201ENST00000623479 597 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AP003072.4-201ENST00000624580 310 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 MIR6830-201ENST00000636015 70 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 AC139713.2-215ENST00000641428 5037 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK3Q00526 AL049737.1-201ENST00000413920 1403 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDK3Q00526 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK3Q00526 MAPK10-303ENST00000641324 3959 ntBASIC4.36□□□□□ -1.71
CDK3Q00526 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK3Q00526 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
CDK3Q00526 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 AL451142.2-201ENST00000429076 2090 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC011155.1-201ENST00000316512 456 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 ANKRD36P1-201ENST00000344424 659 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 SNORA51.12-201ENST00000384448 134 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 SNORA11F-201ENST00000408237 128 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 RPS20P14-201ENST00000412545 360 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC012519.1-201ENST00000424588 610 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AL009174.1-201ENST00000426577 416 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 RPS26P40-201ENST00000435209 294 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 RPL12P46-201ENST00000436610 195 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 ELOCP11-201ENST00000436690 332 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 ELOCP16-201ENST00000444494 332 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 VN1R32P-201ENST00000452234 905 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 DDX39BP2-208ENST00000453923 258 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AP000942.1-201ENST00000463969 747 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK3Q00526 TRAV31-201ENST00000502780 342 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.35□□□□□ -1.71
CDK3Q00526 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 OR7E13P-201ENST00000526052 910 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 MTCYBP23-201ENST00000558717 1102 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 NF1P5-201ENST00000588287 448 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AP001542.2-201ENST00000593141 364 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 RPAP2P1-201ENST00000603626 1168 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC002487.1-201ENST00000604565 994 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC114781.5-201ENST00000615297 108 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AP000843.1-201ENST00000624880 701 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDK3Q00526 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.35□□□□□ -1.71
CDK3Q00526 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.35□□□□□ -1.71
CDK3Q00526 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CDK3Q00526 AC138393.1-206ENST00000540997 1886 ntBASIC4.35□□□□□ -1.71
CDK3Q00526 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK3Q00526 CASC19-204ENST00000641001 2055 ntBASIC4.34□□□□□ -1.71
CDK3Q00526 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.34□□□□□ -1.71
CDK3Q00526 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK3Q00526 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK3Q00526 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CDK3Q00526 SNORA70.2-201ENST00000364506 135 ntBASIC4.34□□□□□ -1.71
CDK3Q00526 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms