Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU2-42P-201ENST00000410697 113 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 RBMY2KP-201ENST00000418221 992 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC010099.3-201ENST00000423896 409 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 MTND1P26-201ENST00000440488 538 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 AL645937.3-201ENST00000453647 936 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC140172.1-201ENST00000502928 141 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 OR5M14P-201ENST00000506803 618 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC005351.1-201ENST00000511152 786 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 SNORA48.10-201ENST00000516965 160 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AP001189.2-201ENST00000527320 189 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC022882.1-201ENST00000532142 501 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC005832.3-201ENST00000537929 631 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.92□□□□□ -1.78
CX3CL1P78423 AL390838.2-201ENST00000602394 274 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 MEMO1P5-201ENST00000604810 406 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC010857.1-201ENST00000606398 594 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC080013.3-201ENST00000606839 578 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC231759.1-201ENST00000616455 597 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AC073348.1-201ENST00000623002 331 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.92□□□□□ -1.78
CX3CL1P78423 OR6C71P-202ENST00000641886 1107 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CX3CL1P78423 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.92□□□□□ -1.78
CX3CL1P78423 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.92□□□□□ -1.78
CX3CL1P78423 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.92□□□□□ -1.78
CX3CL1P78423 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CX3CL1P78423 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 OR51H2P-202ENST00000641424 3046 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 FAM133CP-201ENST00000332869 704 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 IL6STP1-201ENST00000346911 1020 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RNU6-492P-201ENST00000363035 104 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.91□□□□□ -1.78
CX3CL1P78423 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC234779.1-201ENST00000425910 285 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.91□□□□□ -1.78
CX3CL1P78423 USP9YP11-201ENST00000427537 717 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 SKP1P3-201ENST00000429280 487 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC092162.1-201ENST00000432828 434 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 MTCO2P20-201ENST00000437339 673 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 ARL4AP3-201ENST00000441452 574 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.91□□□□□ -1.78
CX3CL1P78423 RPL21P134-201ENST00000453468 483 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 HMGN3P1-201ENST00000453847 193 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 snoU13.20-201ENST00000459180 104 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RN7SL517P-201ENST00000462240 305 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC010307.1-201ENST00000467206 836 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RPL7AP6-201ENST00000477943 801 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RN7SL97P-201ENST00000486780 299 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RN7SL214P-201ENST00000487317 265 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC008638.1-201ENST00000506035 866 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AC018797.3-201ENST00000513388 1241 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RN7SKP31-201ENST00000516354 278 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AP000790.1-201ENST00000528891 737 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 DUXAP5-201ENST00000529668 529 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.91□□□□□ -1.78
CX3CL1P78423 AC010198.2-201ENST00000550612 259 ntBASIC3.91□□□□□ -1.78
CX3CL1P78423 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms