Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 PSMD10P3-201ENST00000437000 448 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 CEACAMP9-201ENST00000442990 513 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 Z73417.1-201ENST00000447373 778 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC007327.1-201ENST00000447461 264 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC079776.3-201ENST00000450665 370 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AL389915.2-201ENST00000454576 441 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.7□□□□□ -1.66
NR1H2P55055 RPL21P103-201ENST00000479921 488 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC109462.1-201ENST00000491087 368 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC105233.1-201ENST00000498840 781 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 NDUFB5P1-201ENST00000508134 564 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC006427.1-201ENST00000514359 712 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 RN7SKP234-201ENST00000517173 224 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.7□□□□□ -1.66
NR1H2P55055 AP001189.2-201ENST00000527320 189 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 LSM6P2-201ENST00000552208 177 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.7□□□□□ -1.66
NR1H2P55055 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.7□□□□□ -1.66
NR1H2P55055 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.7□□□□□ -1.66
NR1H2P55055 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.7□□□□□ -1.66
NR1H2P55055 AC069307.1-201ENST00000602820 447 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC007566.2-201ENST00000603642 413 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC113368.1-201ENST00000603736 382 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AP003117.2-201ENST00000606010 545 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC007390.2-201ENST00000606229 3803 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC016877.3-201ENST00000606778 504 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 SNX18P1Y-201ENST00000616231 511 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AC011330.2-201ENST00000621680 635 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 AP001784.1-201ENST00000624107 428 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NR1H2P55055 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.7□□□□□ -1.66
NR1H2P55055 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.7□□□□□ -1.66
NR1H2P55055 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 MTND4P10-201ENST00000446199 1363 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NR1H2P55055 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 AC008549.2-201ENST00000333482 706 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RNA5SP305-201ENST00000362665 119 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 SNORA17.1-201ENST00000362945 126 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RNU1-20P-201ENST00000363314 162 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RNU1-43P-201ENST00000365052 165 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RNU6-413P-201ENST00000384115 107 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RNU1-106P-201ENST00000384382 164 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 MIR513B-201ENST00000385136 84 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
NR1H2P55055 SNORA40.2-201ENST00000390847 128 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RNU6-1242P-201ENST00000391052 103 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 LAP3P1-201ENST00000403648 294 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AL160275.2-201ENST00000412010 394 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.69□□□□□ -1.66
NR1H2P55055 RPL31P2-201ENST00000413849 377 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.69□□□□□ -1.66
NR1H2P55055 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.69□□□□□ -1.66
NR1H2P55055 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC009237.2-201ENST00000421358 284 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AL513175.2-201ENST00000422071 443 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 PDSS1P1-201ENST00000422953 1114 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 RPL36P19-201ENST00000430744 301 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC073052.1-201ENST00000440417 714 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.69□□□□□ -1.66
NR1H2P55055 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC005410.1-202ENST00000460347 485 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 RN7SL860P-201ENST00000473738 223 ntBASIC4.69□□□□□ -1.66
NR1H2P55055 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.69□□□□□ -1.66
NR1H2P55055 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NR1H2P55055 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms