Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NPM1P48-201ENST00000436002 853 ntBASIC4.41□□□□□ -1.7
NUP98P52948 NPM1P39-201ENST00000449818 867 ntBASIC4.41□□□□□ -1.7
NUP98P52948 HMGB3P22-202ENST00000451823 572 ntBASIC4.41□□□□□ -1.7
NUP98P52948 U3.44-201ENST00000458938 192 ntBASIC4.41□□□□□ -1.7
NUP98P52948 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP98P52948 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NUP98P52948 RNU2-27P-201ENST00000516185 142 ntBASIC4.41□□□□□ -1.7
NUP98P52948 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.41□□□□□ -1.7
NUP98P52948 MIR4276-201ENST00000584832 70 ntBASIC4.41□□□□□ -1.7
NUP98P52948 AC005000.2-201ENST00000605468 310 ntBASIC4.41□□□□□ -1.7
NUP98P52948 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP98P52948 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NUP98P52948 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUP98P52948 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP98P52948 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NUP98P52948 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.4□□□□□ -1.7
NUP98P52948 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.4□□□□□ -1.7
NUP98P52948 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
NUP98P52948 RPS20P1-201ENST00000434853 354 ntBASIC4.4□□□□□ -1.7
NUP98P52948 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.4□□□□□ -1.7
NUP98P52948 AC099563.1-201ENST00000456086 418 ntBASIC4.4□□□□□ -1.7
NUP98P52948 SNORA59A-201ENST00000459326 152 ntBASIC4.4□□□□□ -1.7
NUP98P52948 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.4□□□□□ -1.7
NUP98P52948 AC026782.2-201ENST00000510845 636 ntBASIC4.4□□□□□ -1.7
NUP98P52948 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.4□□□□□ -1.7
NUP98P52948 AC005476.1-201ENST00000554427 397 ntBASIC4.4□□□□□ -1.7
NUP98P52948 AC023389.2-201ENST00000580031 955 ntBASIC4.4□□□□□ -1.7
NUP98P52948 MIR4325-201ENST00000583049 90 ntBASIC4.4□□□□□ -1.7
NUP98P52948 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.4□□□□□ -1.7
NUP98P52948 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.4□□□□□ -1.7
NUP98P52948 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP98P52948 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP98P52948 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP98P52948 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP98P52948 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUP98P52948 RN7SKP111-201ENST00000410349 271 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP98P52948 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP98P52948 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP98P52948 HSPE1P16-201ENST00000426640 348 ntBASIC4.39□□□□□ -1.71
NUP98P52948 RPL26P28-201ENST00000451325 435 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC109925.1-201ENST00000478069 331 ntBASIC4.39□□□□□ -1.71
NUP98P52948 RPL21P13-201ENST00000488305 481 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP98P52948 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP98P52948 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP98P52948 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP98P52948 AC027281.1-201ENST00000574178 758 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP98P52948 MIR4433B-201ENST00000581329 102 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC067852.3-201ENST00000589177 561 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AF131215.7-201ENST00000602443 707 ntBASIC4.39□□□□□ -1.71
NUP98P52948 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP98P52948 BTBD10P1-201ENST00000549824 1352 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC005261.6-201ENST00000623072 1387 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC063923.1-201ENST00000478982 1619 ntBASIC4.39□□□□□ -1.71
NUP98P52948 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP98P52948 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
NUP98P52948 DDX6P1-205ENST00000441966 1436 ntBASIC4.39□□□□□ -1.71
NUP98P52948 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP98P52948 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NUP98P52948 MIR128-1-201ENST00000384921 82 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AL357075.1-201ENST00000404107 726 ntBASIC4.39□□□□□ -1.71
NUP98P52948 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.39□□□□□ -1.71
NUP98P52948 USP12PY-201ENST00000427677 1064 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC006445.1-201ENST00000491925 405 ntBASIC4.39□□□□□ -1.71
NUP98P52948 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
NUP98P52948 IGHV3-32-201ENST00000519182 355 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP98P52948 HMGN2P47-201ENST00000559378 272 ntBASIC4.39□□□□□ -1.71
NUP98P52948 AL732618.1-201ENST00000623251 301 ntBASIC4.39□□□□□ -1.71
NUP98P52948 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
NUP98P52948 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NUP98P52948 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP98P52948 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP98P52948 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP98P52948 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP98P52948 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP98P52948 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
NUP98P52948 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NUP98P52948 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP98P52948 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP98P52948 AC090589.1-201ENST00000473109 362 ntBASIC4.38□□□□□ -1.71
NUP98P52948 AC017015.1-201ENST00000477387 286 ntBASIC4.38□□□□□ -1.71
NUP98P52948 RPS3AP50-201ENST00000487064 803 ntBASIC4.38□□□□□ -1.71
NUP98P52948 PHBP14-201ENST00000512887 367 ntBASIC4.38□□□□□ -1.71
NUP98P52948 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP98P52948 AC233702.9-201ENST00000581528 203 ntBASIC4.38□□□□□ -1.71
NUP98P52948 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP98P52948 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
NUP98P52948 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP98P52948 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP98P52948 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
NUP98P52948 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP98P52948 AC009229.4-201ENST00000623854 1947 ntBASIC4.38□□□□□ -1.71
NUP98P52948 AL645937.1-201ENST00000641739 1652 ntBASIC4.38□□□□□ -1.71
NUP98P52948 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP98P52948 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms