Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 U3.19-201ENST00000390893 196 ntBASIC5.22□□□□□ -1.57
MSH6P52701 SOD2P1-201ENST00000396543 562 ntBASIC5.22□□□□□ -1.57
MSH6P52701 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
MSH6P52701 GSTM3P2-201ENST00000412746 530 ntBASIC5.22□□□□□ -1.57
MSH6P52701 USP9YP36-201ENST00000424581 829 ntBASIC5.22□□□□□ -1.57
MSH6P52701 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.22□□□□□ -1.57
MSH6P52701 USP9YP31-201ENST00000431405 881 ntBASIC5.22□□□□□ -1.57
MSH6P52701 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.22□□□□□ -1.57
MSH6P52701 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.22□□□□□ -1.57
MSH6P52701 AC025518.1-201ENST00000479856 347 ntBASIC5.22□□□□□ -1.57
MSH6P52701 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.22□□□□□ -1.57
MSH6P52701 AC021733.2-201ENST00000518830 497 ntBASIC5.22□□□□□ -1.57
MSH6P52701 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.22□□□□□ -1.57
MSH6P52701 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.22□□□□□ -1.57
MSH6P52701 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.22□□□□□ -1.57
MSH6P52701 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.22□□□□□ -1.57
MSH6P52701 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.22□□□□□ -1.57
MSH6P52701 AC068790.5-201ENST00000602741 355 ntBASIC5.22□□□□□ -1.57
MSH6P52701 AC073869.7-201ENST00000640874 297 ntBASIC5.22□□□□□ -1.57
MSH6P52701 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.22□□□□□ -1.57
MSH6P52701 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.22□□□□□ -1.57
MSH6P52701 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
MSH6P52701 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
MSH6P52701 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MSH6P52701 PROS2P-201ENST00000474651 1951 ntBASIC5.21□□□□□ -1.57
MSH6P52701 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MSH6P52701 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
MSH6P52701 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.21□□□□□ -1.57
MSH6P52701 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MSH6P52701 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
MSH6P52701 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MSH6P52701 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.21□□□□□ -1.58
MSH6P52701 OR52Y1P-201ENST00000452418 828 ntBASIC5.21□□□□□ -1.58
MSH6P52701 AC006517.1-201ENST00000480485 328 ntBASIC5.21□□□□□ -1.58
MSH6P52701 RPS3AP14-201ENST00000483907 780 ntBASIC5.21□□□□□ -1.58
MSH6P52701 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.21□□□□□ -1.58
MSH6P52701 MIR5186-201ENST00000577504 120 ntBASIC5.21□□□□□ -1.58
MSH6P52701 AC006077.1-201ENST00000604746 343 ntBASIC5.21□□□□□ -1.58
MSH6P52701 AC138627.1-204ENST00000641894 765 ntBASIC5.21□□□□□ -1.58
MSH6P52701 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
MSH6P52701 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
MSH6P52701 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
MSH6P52701 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.21□□□□□ -1.58
MSH6P52701 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
MSH6P52701 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MSH6P52701 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MSH6P52701 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
MSH6P52701 TAF9BP1-201ENST00000396646 746 ntBASIC5.2□□□□□ -1.58
MSH6P52701 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH6P52701 UBE2V1P1-201ENST00000430836 445 ntBASIC5.2□□□□□ -1.58
MSH6P52701 ATP5JP1-201ENST00000431631 322 ntBASIC5.2□□□□□ -1.58
MSH6P52701 HMGB1P37-201ENST00000439613 609 ntBASIC5.2□□□□□ -1.58
MSH6P52701 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH6P52701 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.2□□□□□ -1.58
MSH6P52701 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH6P52701 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.2□□□□□ -1.58
MSH6P52701 STMN1P2-201ENST00000508435 439 ntBASIC5.2□□□□□ -1.58
MSH6P52701 AC010342.1-201ENST00000514047 877 ntBASIC5.2□□□□□ -1.58
MSH6P52701 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.2□□□□□ -1.58
MSH6P52701 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 OR5M7P-201ENST00000526140 972 ntBASIC5.2□□□□□ -1.58
MSH6P52701 CYP4A43P-201ENST00000568156 121 ntBASIC5.2□□□□□ -1.58
MSH6P52701 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.2□□□□□ -1.58
MSH6P52701 AC016252.1-201ENST00000609721 474 ntBASIC5.2□□□□□ -1.58
MSH6P52701 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH6P52701 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.2□□□□□ -1.58
MSH6P52701 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
MSH6P52701 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.2□□□□□ -1.58
MSH6P52701 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MSH6P52701 AL353743.1-202ENST00000431724 1695 ntBASIC5.19□□□□□ -1.58
MSH6P52701 RNU1-108P-201ENST00000362556 161 ntBASIC5.19□□□□□ -1.58
MSH6P52701 AL603766.1-201ENST00000407763 664 ntBASIC5.19□□□□□ -1.58
MSH6P52701 BTF3P5-201ENST00000457252 467 ntBASIC5.19□□□□□ -1.58
MSH6P52701 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MSH6P52701 AC073522.1-201ENST00000483312 377 ntBASIC5.19□□□□□ -1.58
MSH6P52701 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.19□□□□□ -1.58
MSH6P52701 MTCO3P22-201ENST00000603219 784 ntBASIC5.19□□□□□ -1.58
MSH6P52701 AC010680.3-201ENST00000604215 520 ntBASIC5.19□□□□□ -1.58
MSH6P52701 MIR7112-201ENST00000616126 65 ntBASIC5.19□□□□□ -1.58
MSH6P52701 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MSH6P52701 MFSD8-236ENST00000641509 4050 ntBASIC5.19□□□□□ -1.58
MSH6P52701 SAMMSON-213ENST00000641336 1521 ntBASIC5.19□□□□□ -1.58
MSH6P52701 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSH6P52701 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSH6P52701 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSH6P52701 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MSH6P52701 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.18□□□□□ -1.58
MSH6P52701 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.18□□□□□ -1.58
MSH6P52701 BX842559.1-201ENST00000419615 532 ntBASIC5.18□□□□□ -1.58
MSH6P52701 EIF4EP1-201ENST00000422311 642 ntBASIC5.18□□□□□ -1.58
MSH6P52701 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.18□□□□□ -1.58
MSH6P52701 RN7SL429P-201ENST00000479090 223 ntBASIC5.18□□□□□ -1.58
MSH6P52701 RN7SL489P-201ENST00000486185 223 ntBASIC5.18□□□□□ -1.58
MSH6P52701 RN7SL327P-201ENST00000488659 223 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms