Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.5□□□□□ -1.69
CENPAP49450 USP9YP11-201ENST00000427537 717 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AL121776.1-201ENST00000429337 372 ntBASIC4.5□□□□□ -1.69
CENPAP49450 USP9YP31-201ENST00000431405 881 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.5□□□□□ -1.69
CENPAP49450 AL354714.3-201ENST00000447284 493 ntBASIC4.5□□□□□ -1.69
CENPAP49450 COX6CP18-201ENST00000448769 222 ntBASIC4.5□□□□□ -1.69
CENPAP49450 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 AC234781.3-201ENST00000452540 973 ntBASIC4.5□□□□□ -1.69
CENPAP49450 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 AL356981.1-201ENST00000454879 684 ntBASIC4.5□□□□□ -1.69
CENPAP49450 RN7SL174P-201ENST00000475578 289 ntBASIC4.5□□□□□ -1.69
CENPAP49450 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 AC010350.1-201ENST00000504908 231 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AC008885.2-201ENST00000509506 930 ntBASIC4.5□□□□□ -1.69
CENPAP49450 RN7SKP260-201ENST00000516907 149 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 MTND2P26-201ENST00000528255 1029 ntBASIC4.5□□□□□ -1.69
CENPAP49450 PDCL2P2-201ENST00000533651 189 ntBASIC4.5□□□□□ -1.69
CENPAP49450 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 AC007424.1-203ENST00000554613 687 ntBASIC4.5□□□□□ -1.69
CENPAP49450 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.5□□□□□ -1.69
CENPAP49450 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.5□□□□□ -1.69
CENPAP49450 AL133507.1-201ENST00000605269 557 ntBASIC4.5□□□□□ -1.69
CENPAP49450 RPSAP73-201ENST00000614820 330 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AC121761.2-201ENST00000617300 689 ntBASIC4.5□□□□□ -1.69
CENPAP49450 AC234782.5-201ENST00000617723 324 ntBASIC4.5□□□□□ -1.69
CENPAP49450 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 CASC19-264ENST00000641912 1184 ntBASIC4.5□□□□□ -1.69
CENPAP49450 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.5□□□□□ -1.69
CENPAP49450 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CENPAP49450 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CENPAP49450 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CENPAP49450 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.49□□□□□ -1.69
CENPAP49450 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CENPAP49450 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.49□□□□□ -1.69
CENPAP49450 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CENPAP49450 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CENPAP49450 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CENPAP49450 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CENPAP49450 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CENPAP49450 AL022393.1-201ENST00000625142 1677 ntBASIC4.49□□□□□ -1.69
CENPAP49450 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CENPAP49450 RNA5SP183-201ENST00000362452 119 ntBASIC4.49□□□□□ -1.69
CENPAP49450 RNU6-839P-201ENST00000363347 108 ntBASIC4.49□□□□□ -1.69
CENPAP49450 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.49□□□□□ -1.69
CENPAP49450 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 LAP3P1-201ENST00000403648 294 ntBASIC4.49□□□□□ -1.69
CENPAP49450 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.49□□□□□ -1.69
CENPAP49450 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 OR2AH1P-201ENST00000425717 928 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 ATP5F1P1-201ENST00000433775 569 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.49□□□□□ -1.69
CENPAP49450 RPS29P9-201ENST00000440360 171 ntBASIC4.49□□□□□ -1.69
CENPAP49450 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.49□□□□□ -1.69
CENPAP49450 KNOP1P3-201ENST00000446933 426 ntBASIC4.49□□□□□ -1.69
CENPAP49450 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.49□□□□□ -1.69
CENPAP49450 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 AL133477.1-201ENST00000457472 514 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AL591473.1-201ENST00000464297 313 ntBASIC4.49□□□□□ -1.69
CENPAP49450 RPL21P71-201ENST00000465598 459 ntBASIC4.49□□□□□ -1.69
CENPAP49450 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.49□□□□□ -1.69
CENPAP49450 RPS18P6-201ENST00000476880 458 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AP000926.1-201ENST00000479573 241 ntBASIC4.49□□□□□ -1.69
CENPAP49450 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 PGAM1P13-201ENST00000507497 754 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.49□□□□□ -1.69
CENPAP49450 AC087808.1-201ENST00000520501 361 ntBASIC4.49□□□□□ -1.69
CENPAP49450 HIGD1AP6-201ENST00000521833 279 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AP001207.1-201ENST00000524051 481 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AP000619.3-201ENST00000535634 1127 ntBASIC4.49□□□□□ -1.69
CENPAP49450 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.49□□□□□ -1.69
CENPAP49450 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 AC004825.1-201ENST00000555068 586 ntBASIC4.49□□□□□ -1.69
CENPAP49450 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.49□□□□□ -1.69
CENPAP49450 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.49□□□□□ -1.69
CENPAP49450 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.49□□□□□ -1.69
CENPAP49450 AL021707.7-201ENST00000607991 416 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AP005432.2-201ENST00000608162 586 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AC097505.1-201ENST00000610199 565 ntBASIC4.49□□□□□ -1.69
CENPAP49450 AC090246.1-201ENST00000616499 426 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms