Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AL627224.1-201ENST00000448334 444 ntBASIC3.97□□□□□ -1.77
RORAP35398 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.97□□□□□ -1.77
RORAP35398 FAM133DP-201ENST00000464802 691 ntBASIC3.97□□□□□ -1.77
RORAP35398 RN7SL604P-201ENST00000492589 296 ntBASIC3.97□□□□□ -1.77
RORAP35398 AC106872.2-201ENST00000494303 480 ntBASIC3.97□□□□□ -1.77
RORAP35398 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.97□□□□□ -1.77
RORAP35398 CDH12P2-201ENST00000504393 298 ntBASIC3.97□□□□□ -1.77
RORAP35398 AC021087.2-201ENST00000504656 1203 ntBASIC3.97□□□□□ -1.77
RORAP35398 FABP5P6-201ENST00000510588 409 ntBASIC3.97□□□□□ -1.77
RORAP35398 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.97□□□□□ -1.77
RORAP35398 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RORAP35398 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.97□□□□□ -1.77
RORAP35398 AC008083.2-201ENST00000546707 476 ntBASIC3.97□□□□□ -1.77
RORAP35398 CBX3P5-201ENST00000552017 521 ntBASIC3.97□□□□□ -1.77
RORAP35398 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.97□□□□□ -1.77
RORAP35398 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.97□□□□□ -1.77
RORAP35398 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.97□□□□□ -1.77
RORAP35398 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.97□□□□□ -1.77
RORAP35398 uc_338.32-201ENST00000615087 172 ntBASIC3.97□□□□□ -1.77
RORAP35398 MIR7151-201ENST00000617477 60 ntBASIC3.97□□□□□ -1.77
RORAP35398 AL713922.2-201ENST00000619384 716 ntBASIC3.97□□□□□ -1.77
RORAP35398 AL359715.5-201ENST00000623431 443 ntBASIC3.97□□□□□ -1.77
RORAP35398 OR5AC4P-202ENST00000642086 985 ntBASIC3.97□□□□□ -1.77
RORAP35398 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
RORAP35398 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.97□□□□□ -1.77
RORAP35398 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RORAP35398 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RORAP35398 DCAF13P3-201ENST00000561147 1334 ntBASIC3.96□□□□□ -1.77
RORAP35398 AL627171.1-201ENST00000618845 1308 ntBASIC3.96□□□□□ -1.77
RORAP35398 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
RORAP35398 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.96□□□□□ -1.77
RORAP35398 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RORAP35398 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 AC083799.1-201ENST00000366451 910 ntBASIC3.96□□□□□ -1.78
RORAP35398 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.96□□□□□ -1.78
RORAP35398 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
RORAP35398 RNU11-4P-201ENST00000391149 133 ntBASIC3.96□□□□□ -1.78
RORAP35398 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 ZNF603P-201ENST00000405613 487 ntBASIC3.96□□□□□ -1.78
RORAP35398 VN1R8P-201ENST00000407739 893 ntBASIC3.96□□□□□ -1.78
RORAP35398 RNU6-628P-201ENST00000410675 107 ntBASIC3.96□□□□□ -1.78
RORAP35398 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.96□□□□□ -1.78
RORAP35398 SAGE2P-201ENST00000420011 2126 ntBASIC3.96□□□□□ -1.78
RORAP35398 MTCO1P57-201ENST00000432182 261 ntBASIC3.96□□□□□ -1.78
RORAP35398 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 RPL23AP46-201ENST00000438548 490 ntBASIC3.96□□□□□ -1.78
RORAP35398 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 RPL21P89-201ENST00000444021 467 ntBASIC3.96□□□□□ -1.78
RORAP35398 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.96□□□□□ -1.78
RORAP35398 HMGB1P16-201ENST00000447155 540 ntBASIC3.96□□□□□ -1.78
RORAP35398 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 RPS29P19-201ENST00000479709 171 ntBASIC3.96□□□□□ -1.78
RORAP35398 AF213884.1-201ENST00000488102 463 ntBASIC3.96□□□□□ -1.78
RORAP35398 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.96□□□□□ -1.78
RORAP35398 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.96□□□□□ -1.78
RORAP35398 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 IGHV3-32-201ENST00000519182 355 ntBASIC3.96□□□□□ -1.78
RORAP35398 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.96□□□□□ -1.78
RORAP35398 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
RORAP35398 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.96□□□□□ -1.78
RORAP35398 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.96□□□□□ -1.78
RORAP35398 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 RLIMP1-201ENST00000339626 1680 ntBASIC3.96□□□□□ -1.78
RORAP35398 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RORAP35398 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RORAP35398 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RORAP35398 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.95□□□□□ -1.78
RORAP35398 AL359715.4-201ENST00000606629 1436 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC025125.1-201ENST00000624743 1922 ntBASIC3.95□□□□□ -1.78
RORAP35398 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.95□□□□□ -1.78
RORAP35398 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
RORAP35398 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RORAP35398 RNU6-31P-201ENST00000384388 108 ntBASIC3.95□□□□□ -1.78
RORAP35398 AL445189.1-201ENST00000405722 338 ntBASIC3.95□□□□□ -1.78
RORAP35398 RPL21P65-201ENST00000406094 466 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.95□□□□□ -1.78
RORAP35398 AC092832.1-201ENST00000422934 400 ntBASIC3.95□□□□□ -1.78
RORAP35398 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.95□□□□□ -1.78
RORAP35398 PRELID3BP10-201ENST00000431957 584 ntBASIC3.95□□□□□ -1.78
RORAP35398 NDUFA5P10-201ENST00000432147 357 ntBASIC3.95□□□□□ -1.78
RORAP35398 MRPS33P4-201ENST00000434892 317 ntBASIC3.95□□□□□ -1.78
RORAP35398 RSL24D1P2-201ENST00000445584 366 ntBASIC3.95□□□□□ -1.78
RORAP35398 AL359073.1-201ENST00000448036 403 ntBASIC3.95□□□□□ -1.78
RORAP35398 AL162151.2-201ENST00000448875 158 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms