Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC007342.9-201ENST00000623877 1385 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA9P31269 LINC00561-201ENST00000565815 2738 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA9P31269 U1.1-201ENST00000384101 164 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 MIR1251-201ENST00000408552 70 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 YME1L1P1-201ENST00000429435 297 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA9P31269 PDSS1P2-201ENST00000449397 678 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA9P31269 AC022336.1-201ENST00000475510 337 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 PPIAP15-201ENST00000479662 484 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.14□□□□□ -1.75
HOXA9P31269 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 RNU6-352P-201ENST00000516908 107 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC087369.1-201ENST00000520775 996 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA9P31269 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA9P31269 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.14□□□□□ -1.75
HOXA9P31269 AC022968.1-201ENST00000567372 442 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC009303.3-201ENST00000591103 736 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA9P31269 AC079791.1-201ENST00000605356 973 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AL391497.1-201ENST00000608671 547 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC004825.2-201ENST00000616634 455 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC244100.1-202ENST00000621554 382 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 AC020978.9-201ENST00000624380 1141 ntBASIC4.14□□□□□ -1.75
HOXA9P31269 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA9P31269 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
HOXA9P31269 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.14□□□□□ -1.75
HOXA9P31269 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA9P31269 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA9P31269 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
HOXA9P31269 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 ZNF285B-201ENST00000561698 1767 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXA9P31269 GCNT6-201ENST00000379591 934 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 SNORA5A-201ENST00000384111 134 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AC240504.1-201ENST00000395709 845 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 RNA5SP239-201ENST00000410218 129 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA9P31269 AC083863.1-201ENST00000438811 231 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AL353748.1-201ENST00000440753 474 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 RPL7P31-201ENST00000450192 724 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA9P31269 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA9P31269 SNORD116-26-201ENST00000516006 96 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA9P31269 AC022784.5-201ENST00000522241 437 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 NPM1P35-201ENST00000533043 868 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
HOXA9P31269 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 AL049634.3-201ENST00000604968 457 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXA9P31269 AC015922.4-201ENST00000612568 690 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXA9P31269 AC009452.1-201ENST00000640823 606 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 CASC19-284ENST00000642142 1868 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 AC110792.3-201ENST00000595906 1614 ntBASIC4.13□□□□□ -1.75
HOXA9P31269 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXA9P31269 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA9P31269 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXA9P31269 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXA9P31269 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXA9P31269 SNORD74.4-201ENST00000364129 80 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXA9P31269 RNU6-225P-201ENST00000384613 103 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 MIR3074-201ENST00000384885 81 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 RPL21P17-201ENST00000397467 475 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXA9P31269 SNORA11.1-201ENST00000408133 129 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
HOXA9P31269 RFESDP1-201ENST00000422350 461 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AL138785.1-201ENST00000425821 331 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AL591419.1-201ENST00000427423 339 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AC073069.1-201ENST00000428657 441 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXA9P31269 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXA9P31269 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXA9P31269 EIF2S2P4-201ENST00000461070 984 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 AL133162.1-201ENST00000463228 453 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 METTL15P1-201ENST00000481421 1045 ntBASIC4.12□□□□□ -1.75
HOXA9P31269 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXA9P31269 UBE2CP3-201ENST00000502715 450 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms