Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 NANOGP6-201ENST00000429190 847 ntBASIC5.02□□□□□ -1.61
CD40P25942 MTND1P2-201ENST00000430604 821 ntBASIC5.02□□□□□ -1.61
CD40P25942 RPEP2-201ENST00000432149 701 ntBASIC5.02□□□□□ -1.61
CD40P25942 AL358934.1-201ENST00000432346 324 ntBASIC5.02□□□□□ -1.61
CD40P25942 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40P25942 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CD40P25942 RPS23P6-201ENST00000466136 431 ntBASIC5.02□□□□□ -1.61
CD40P25942 MTND1P3-201ENST00000484956 952 ntBASIC5.02□□□□□ -1.61
CD40P25942 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.02□□□□□ -1.61
CD40P25942 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40P25942 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40P25942 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40P25942 AC022404.1-201ENST00000555320 273 ntBASIC5.02□□□□□ -1.61
CD40P25942 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40P25942 MIR3682-201ENST00000581338 84 ntBASIC5.02□□□□□ -1.61
CD40P25942 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.02□□□□□ -1.61
CD40P25942 HMGN1P30-201ENST00000589286 268 ntBASIC5.02□□□□□ -1.61
CD40P25942 AL390208.1-201ENST00000605885 644 ntBASIC5.02□□□□□ -1.61
CD40P25942 AC091304.9-201ENST00000612091 226 ntBASIC5.02□□□□□ -1.61
CD40P25942 AL355974.3-201ENST00000617383 467 ntBASIC5.02□□□□□ -1.61
CD40P25942 U6.42-201ENST00000618440 107 ntBASIC5.02□□□□□ -1.61
CD40P25942 AC069234.4-201ENST00000621276 412 ntBASIC5.02□□□□□ -1.61
CD40P25942 AC124864.2-201ENST00000624736 186 ntBASIC5.02□□□□□ -1.61
CD40P25942 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40P25942 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CD40P25942 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.02□□□□□ -1.61
CD40P25942 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40P25942 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40P25942 AL049780.3-201ENST00000624612 1583 ntBASIC5.02□□□□□ -1.61
CD40P25942 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CD40P25942 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.02□□□□□ -1.61
CD40P25942 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
CD40P25942 AL592148.3-201ENST00000608771 2646 ntBASIC5.02□□□□□ -1.61
CD40P25942 AC011504.1-201ENST00000623331 4103 ntBASIC5.02□□□□□ -1.61
CD40P25942 PHKBP1-201ENST00000450951 1951 ntBASIC5.02□□□□□ -1.61
CD40P25942 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40P25942 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CD40P25942 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CD40P25942 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CD40P25942 U8.3-201ENST00000363321 132 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNU6-853P-201ENST00000364306 107 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.01□□□□□ -1.61
CD40P25942 AL451142.1-201ENST00000375867 775 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNU6-146P-201ENST00000384602 108 ntBASIC5.01□□□□□ -1.61
CD40P25942 SNORD115-47-201ENST00000391226 86 ntBASIC5.01□□□□□ -1.61
CD40P25942 RPL7P58-201ENST00000402913 758 ntBASIC5.01□□□□□ -1.61
CD40P25942 OR2W4P-201ENST00000406496 926 ntBASIC5.01□□□□□ -1.61
CD40P25942 AL513325.1-201ENST00000417716 1034 ntBASIC5.01□□□□□ -1.61
CD40P25942 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.01□□□□□ -1.61
CD40P25942 USP9YP36-201ENST00000424581 829 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC233728.2-201ENST00000425348 757 ntBASIC5.01□□□□□ -1.61
CD40P25942 ISCA1P6-201ENST00000427740 390 ntBASIC5.01□□□□□ -1.61
CD40P25942 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40P25942 AL353597.2-202ENST00000434901 373 ntBASIC5.01□□□□□ -1.61
CD40P25942 CLUHP1-201ENST00000435012 1190 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC009961.2-201ENST00000435771 251 ntBASIC5.01□□□□□ -1.61
CD40P25942 AL450263.2-201ENST00000439400 589 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.01□□□□□ -1.61
CD40P25942 AP000281.1-201ENST00000444036 316 ntBASIC5.01□□□□□ -1.61
CD40P25942 FAM103A2P-201ENST00000444122 354 ntBASIC5.01□□□□□ -1.61
CD40P25942 Z99127.3-201ENST00000448158 395 ntBASIC5.01□□□□□ -1.61
CD40P25942 PSPHP1-201ENST00000450062 261 ntBASIC5.01□□□□□ -1.61
CD40P25942 FGF7P6-202ENST00000451282 293 ntBASIC5.01□□□□□ -1.61
CD40P25942 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.01□□□□□ -1.61
CD40P25942 AL121769.1-201ENST00000469473 401 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC087312.1-201ENST00000471411 480 ntBASIC5.01□□□□□ -1.61
CD40P25942 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.01□□□□□ -1.61
CD40P25942 AC013356.1-201ENST00000489027 564 ntBASIC5.01□□□□□ -1.61
CD40P25942 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.01□□□□□ -1.61
CD40P25942 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.01□□□□□ -1.61
CD40P25942 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 OR5M14P-201ENST00000506803 618 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC006390.1-201ENST00000508068 283 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC108078.1-201ENST00000508073 725 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNU6-615P-201ENST00000516065 106 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNU6-941P-201ENST00000516346 108 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNU6-714P-201ENST00000516963 103 ntBASIC5.01□□□□□ -1.61
CD40P25942 RNU2-46P-201ENST00000517038 113 ntBASIC5.01□□□□□ -1.61
CD40P25942 SNORA43.3-201ENST00000517240 103 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 RPS3AP4-201ENST00000555161 764 ntBASIC5.01□□□□□ -1.61
CD40P25942 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CD40P25942 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.01□□□□□ -1.61
CD40P25942 AL391840.1-201ENST00000571144 367 ntBASIC5.01□□□□□ -1.61
CD40P25942 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms