Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC138749.5-201ENST00000611461 208 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC6.57□□□□□ -1.36
ERCC3P19447 AC000123.2-201ENST00000623124 461 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 CRYM-AS1-204ENST00000637983 556 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.57□□□□□ -1.36
ERCC3P19447 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.57□□□□□ -1.36
ERCC3P19447 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ERCC3P19447 AL121839.2-201ENST00000565058 6943 ntBASIC6.57□□□□□ -1.36
ERCC3P19447 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC3P19447 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC3P19447 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ERCC3P19447 RNA5SP319-201ENST00000362768 119 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 GNG5P2-201ENST00000372054 207 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ERCC3P19447 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC3P19447 HMGB3P23-201ENST00000414981 585 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 RPS3AP9-201ENST00000417027 792 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AIMP1P1-201ENST00000418670 937 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 SKP1P1-201ENST00000438081 489 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AL589765.3-201ENST00000446084 462 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 ARPC3P5-201ENST00000448802 534 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AL450023.1-201ENST00000450868 751 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AL033528.1-201ENST00000453780 140 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 KLF3P2-201ENST00000465138 268 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AC010683.1-201ENST00000473673 378 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
ERCC3P19447 AC108941.1-201ENST00000502853 530 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AC138853.1-201ENST00000503549 823 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC3P19447 GTF2F2P1-201ENST00000511083 675 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.56□□□□□ -1.36
ERCC3P19447 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC3P19447 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.56□□□□□ -1.36
ERCC3P19447 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC3P19447 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 RN7SL802P-201ENST00000577858 299 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.56□□□□□ -1.36
ERCC3P19447 AP001180.3-201ENST00000582221 145 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC3P19447 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.56□□□□□ -1.36
ERCC3P19447 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.56□□□□□ -1.36
ERCC3P19447 AC090948.2-201ENST00000607363 564 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AC098614.4-201ENST00000607601 462 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
ERCC3P19447 AC026368.1-201ENST00000614934 690 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 AL139089.1-201ENST00000620372 975 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 MIR6837-201ENST00000620884 64 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.56□□□□□ -1.36
ERCC3P19447 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.56□□□□□ -1.36
ERCC3P19447 MTND5P28-201ENST00000438005 1594 ntBASIC6.56□□□□□ -1.36
ERCC3P19447 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
ERCC3P19447 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
ERCC3P19447 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 AP004607.3-201ENST00000530354 3915 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
ERCC3P19447 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.55□□□□□ -1.36
ERCC3P19447 RNU6-1226P-201ENST00000384317 107 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RNU6-146P-201ENST00000384602 108 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RNU6-952P-201ENST00000391164 108 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 OR8V1P-201ENST00000395193 873 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RPL23AP17-201ENST00000401064 499 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RPS3AP23-201ENST00000401762 784 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 Y_RNA.598-201ENST00000410480 95 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RN7SKP17-201ENST00000411242 351 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC010975.2-201ENST00000427781 588 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RPS3AP38-201ENST00000435889 763 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 MTND5P14-201ENST00000441481 1267 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC019185.1-201ENST00000442718 389 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 GEMIN8P3-201ENST00000445417 720 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 MTCO1P27-201ENST00000448269 226 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC3P19447 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 BX322784.1-201ENST00000455793 1077 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RNU1-88P-201ENST00000459274 128 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 PLGLA-201ENST00000465668 449 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms