Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.2□□□□□ -1.1
CD44P16070 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 RNA5SP448-201ENST00000363151 111 ntBASIC8.2□□□□□ -1.1
CD44P16070 RN7SKP63-201ENST00000363187 301 ntBASIC8.2□□□□□ -1.1
CD44P16070 RNU6-97P-201ENST00000363387 104 ntBASIC8.2□□□□□ -1.1
CD44P16070 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.2□□□□□ -1.1
CD44P16070 RN7SKP131-201ENST00000410698 301 ntBASIC8.2□□□□□ -1.1
CD44P16070 AC009413.1-201ENST00000414823 399 ntBASIC8.2□□□□□ -1.1
CD44P16070 AL593856.1-201ENST00000419949 805 ntBASIC8.2□□□□□ -1.1
CD44P16070 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.2□□□□□ -1.1
CD44P16070 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC8.2□□□□□ -1.1
CD44P16070 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC8.2□□□□□ -1.1
CD44P16070 ACA59.1-201ENST00000515966 143 ntBASIC8.2□□□□□ -1.1
CD44P16070 IGKV2D-10-201ENST00000520194 281 ntBASIC8.2□□□□□ -1.1
CD44P16070 FAM60DP-201ENST00000524174 632 ntBASIC8.2□□□□□ -1.1
CD44P16070 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.2□□□□□ -1.1
CD44P16070 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC8.2□□□□□ -1.1
CD44P16070 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.2□□□□□ -1.1
CD44P16070 AL137190.1-201ENST00000603288 282 ntBASIC8.2□□□□□ -1.1
CD44P16070 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 AL021918.1-201ENST00000603933 236 ntBASIC8.2□□□□□ -1.1
CD44P16070 AL109918.2-201ENST00000605188 279 ntBASIC8.2□□□□□ -1.1
CD44P16070 Y_RNA.772-201ENST00000606692 102 ntBASIC8.2□□□□□ -1.1
CD44P16070 AL136985.2-201ENST00000607372 535 ntBASIC8.2□□□□□ -1.1
CD44P16070 AC023813.4-201ENST00000607580 580 ntBASIC8.2□□□□□ -1.1
CD44P16070 AC135050.6-202ENST00000613584 392 ntBASIC8.2□□□□□ -1.1
CD44P16070 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
CD44P16070 AC092111.1-201ENST00000618256 3358 ntBASIC8.2□□□□□ -1.1
CD44P16070 EEF1A1P36-201ENST00000427807 1351 ntBASIC8.2□□□□□ -1.1
CD44P16070 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.2□□□□□ -1.1
CD44P16070 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CD44P16070 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 AC105114.1-201ENST00000624795 1862 ntBASIC8.19□□□□□ -1.1
CD44P16070 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CD44P16070 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 AC138393.1-203ENST00000327086 343 ntBASIC8.19□□□□□ -1.1
CD44P16070 RNA5SP218-201ENST00000363188 109 ntBASIC8.19□□□□□ -1.1
CD44P16070 Y_RNA.275-201ENST00000364726 110 ntBASIC8.19□□□□□ -1.1
CD44P16070 RNU6-715P-201ENST00000365204 103 ntBASIC8.19□□□□□ -1.1
CD44P16070 RNU6-326P-201ENST00000365480 107 ntBASIC8.19□□□□□ -1.1
CD44P16070 RNU6-1329P-201ENST00000365664 107 ntBASIC8.19□□□□□ -1.1
CD44P16070 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 RN7SKP284-201ENST00000411002 343 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC244452.1-201ENST00000413798 141 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.19□□□□□ -1.1
CD44P16070 DPPA2P2-201ENST00000418220 897 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 PIGFP3-201ENST00000441918 722 ntBASIC8.19□□□□□ -1.1
CD44P16070 LIN28AP2-201ENST00000445283 458 ntBASIC8.19□□□□□ -1.1
CD44P16070 UBBP5-201ENST00000446970 266 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC8.19□□□□□ -1.1
CD44P16070 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 RN7SL239P-201ENST00000490061 300 ntBASIC8.19□□□□□ -1.1
CD44P16070 AP006245.1-201ENST00000522549 120 ntBASIC8.19□□□□□ -1.1
CD44P16070 AP003396.4-201ENST00000527574 265 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 DNM1P31-201ENST00000564149 696 ntBASIC8.19□□□□□ -1.1
CD44P16070 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.19□□□□□ -1.1
CD44P16070 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC8.19□□□□□ -1.1
CD44P16070 MIR4642-201ENST00000583943 82 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC129492.5-201ENST00000603489 315 ntBASIC8.19□□□□□ -1.1
CD44P16070 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 AL591516.1-201ENST00000611326 274 ntBASIC8.19□□□□□ -1.1
CD44P16070 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 AC012100.3-201ENST00000624738 575 ntBASIC8.19□□□□□ -1.1
CD44P16070 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
CD44P16070 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.19□□□□□ -1.1
CD44P16070 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 AC006058.1-201ENST00000568686 5067 ntBASIC8.19□□□□□ -1.1
CD44P16070 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC8.19□□□□□ -1.1
CD44P16070 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CD44P16070 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CD44P16070 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.18□□□□□ -1.1
CD44P16070 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms