Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT3P12035 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT3P12035 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRT3P12035 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.39□□□□□ -1.71
KRT3P12035 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KRT3P12035 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 SNORA63.3-201ENST00000362682 132 ntBASIC4.38□□□□□ -1.71
KRT3P12035 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 RNU6-317P-201ENST00000384031 107 ntBASIC4.38□□□□□ -1.71
KRT3P12035 UBE2V1P11-201ENST00000411559 285 ntBASIC4.38□□□□□ -1.71
KRT3P12035 RPL23AP26-201ENST00000412728 464 ntBASIC4.38□□□□□ -1.71
KRT3P12035 LINC01347-201ENST00000417964 355 ntBASIC4.38□□□□□ -1.71
KRT3P12035 PNRC2P1-201ENST00000423940 420 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 COX6B1P7-201ENST00000430845 235 ntBASIC4.38□□□□□ -1.71
KRT3P12035 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 TPTE2P6-202ENST00000445572 1007 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC104306.1-201ENST00000449702 371 ntBASIC4.38□□□□□ -1.71
KRT3P12035 TPT1P13-201ENST00000449760 499 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.38□□□□□ -1.71
KRT3P12035 AC006463.2-201ENST00000473326 348 ntBASIC4.38□□□□□ -1.71
KRT3P12035 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 OR5H3P-201ENST00000502817 919 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC099522.1-202ENST00000514718 367 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC112206.4-201ENST00000515142 405 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT3P12035 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRT3P12035 POLR2KP1-201ENST00000553226 168 ntBASIC4.38□□□□□ -1.71
KRT3P12035 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.38□□□□□ -1.71
KRT3P12035 MIR4512-201ENST00000583257 77 ntBASIC4.38□□□□□ -1.71
KRT3P12035 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 AC010680.3-201ENST00000604215 520 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 AC005014.3-201ENST00000605985 190 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
KRT3P12035 OR6R2P-201ENST00000609216 300 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC245100.7-201ENST00000609678 442 ntBASIC4.38□□□□□ -1.71
KRT3P12035 MIR8084-201ENST00000614105 89 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC139769.3-201ENST00000618383 175 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AC106730.3-201ENST00000624568 641 ntBASIC4.38□□□□□ -1.71
KRT3P12035 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 AL136520.1-201ENST00000600311 1322 ntBASIC4.38□□□□□ -1.71
KRT3P12035 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.38□□□□□ -1.71
KRT3P12035 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
KRT3P12035 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT3P12035 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT3P12035 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 MIR93-201ENST00000385024 80 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AL161909.1-201ENST00000397390 712 ntBASIC4.37□□□□□ -1.71
KRT3P12035 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 HMGB3P18-201ENST00000406327 590 ntBASIC4.37□□□□□ -1.71
KRT3P12035 RPL18P10-201ENST00000425606 538 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC012497.1-201ENST00000429392 575 ntBASIC4.37□□□□□ -1.71
KRT3P12035 MTCO1P43-201ENST00000431831 488 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT3P12035 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT3P12035 CBX1P4-201ENST00000439415 457 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT3P12035 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT3P12035 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT3P12035 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
KRT3P12035 AC010683.1-201ENST00000473673 378 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC091167.1-201ENST00000492017 396 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC108475.1-201ENST00000507880 950 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC106806.2-201ENST00000509365 500 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT3P12035 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.37□□□□□ -1.71
KRT3P12035 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT3P12035 AC034205.1-201ENST00000520621 638 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT3P12035 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.37□□□□□ -1.71
KRT3P12035 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC022655.2-201ENST00000577280 318 ntBASIC4.37□□□□□ -1.71
KRT3P12035 MIR4700-201ENST00000578311 74 ntBASIC4.37□□□□□ -1.71
KRT3P12035 MIR4458-201ENST00000578872 75 ntBASIC4.37□□□□□ -1.71
KRT3P12035 MIR4284-201ENST00000578924 81 ntBASIC4.37□□□□□ -1.71
KRT3P12035 IPO5P1-202ENST00000600039 287 ntBASIC4.37□□□□□ -1.71
KRT3P12035 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.37□□□□□ -1.71
KRT3P12035 AL139286.1-201ENST00000604465 483 ntBASIC4.37□□□□□ -1.71
KRT3P12035 BX323046.1-201ENST00000610145 535 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms