Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RN7SKP97-201ENST00000410966 333 ntBASIC6.18□□□□□ -1.42
TOP2AP11388 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.18□□□□□ -1.42
TOP2AP11388 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP2AP11388 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.18□□□□□ -1.42
TOP2AP11388 SEPT14P1-201ENST00000458703 648 ntBASIC6.18□□□□□ -1.42
TOP2AP11388 KLKP1-201ENST00000595979 403 ntBASIC6.18□□□□□ -1.42
TOP2AP11388 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP2AP11388 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC6.18□□□□□ -1.42
TOP2AP11388 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TOP2AP11388 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TOP2AP11388 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
TOP2AP11388 AL353743.1-202ENST00000431724 1695 ntBASIC6.17□□□□□ -1.42
TOP2AP11388 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TOP2AP11388 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TOP2AP11388 UBE2V1P1-201ENST00000430836 445 ntBASIC6.17□□□□□ -1.42
TOP2AP11388 UBE2NP1-201ENST00000545592 458 ntBASIC6.17□□□□□ -1.42
TOP2AP11388 EIF4BP1-201ENST00000554881 351 ntBASIC6.17□□□□□ -1.42
TOP2AP11388 AC067852.3-201ENST00000589177 561 ntBASIC6.17□□□□□ -1.42
TOP2AP11388 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
TOP2AP11388 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.17□□□□□ -1.42
TOP2AP11388 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.17□□□□□ -1.42
TOP2AP11388 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TOP2AP11388 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TOP2AP11388 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
TOP2AP11388 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP2AP11388 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TOP2AP11388 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP2AP11388 RPL23AP57-201ENST00000332361 466 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP2AP11388 AL034403.1-201ENST00000399414 885 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 HSPE1P27-201ENST00000430808 296 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 NPM1P48-201ENST00000436002 853 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.16□□□□□ -1.42
TOP2AP11388 RN7SL594P-201ENST00000470590 287 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC6.16□□□□□ -1.42
TOP2AP11388 RN7SL504P-201ENST00000494496 287 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP2AP11388 HMGB1P21-201ENST00000502313 581 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 IGKV2-26-201ENST00000518305 343 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 AC008489.1-201ENST00000524271 483 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP2AP11388 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.16□□□□□ -1.42
TOP2AP11388 AC068993.1-201ENST00000546724 589 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 AC011611.1-201ENST00000552179 197 ntBASIC6.16□□□□□ -1.42
TOP2AP11388 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.16□□□□□ -1.42
TOP2AP11388 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.16□□□□□ -1.42
TOP2AP11388 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP2AP11388 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP2AP11388 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TOP2AP11388 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
TOP2AP11388 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP2AP11388 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
TOP2AP11388 RNA5SP42-201ENST00000364278 115 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 RHOT1P2-201ENST00000366423 333 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 U3.19-201ENST00000390893 196 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.15□□□□□ -1.42
TOP2AP11388 OR6C71P-201ENST00000432580 913 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 RPS29P31-201ENST00000446147 164 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.15□□□□□ -1.42
TOP2AP11388 IGHV3-63-201ENST00000518422 341 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.15□□□□□ -1.42
TOP2AP11388 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP2AP11388 AC026422.1-201ENST00000623961 452 ntBASIC6.15□□□□□ -1.42
TOP2AP11388 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TOP2AP11388 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TOP2AP11388 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TOP2AP11388 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
TOP2AP11388 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TOP2AP11388 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TOP2AP11388 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
TOP2AP11388 SNORA38.1-201ENST00000364172 131 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 MIR513A2-201ENST00000385249 127 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 BOLA3P4-201ENST00000418151 400 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.15□□□□□ -1.43
TOP2AP11388 AL671855.1-201ENST00000446875 1203 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.15□□□□□ -1.43
TOP2AP11388 NPM1P39-201ENST00000449818 867 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 IGHV3-32-201ENST00000519182 355 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.15□□□□□ -1.43
TOP2AP11388 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.15□□□□□ -1.43
TOP2AP11388 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TOP2AP11388 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.14□□□□□ -1.43
TOP2AP11388 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TOP2AP11388 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TOP2AP11388 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
TOP2AP11388 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
TOP2AP11388 MIR1289-1-201ENST00000408836 144 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.14□□□□□ -1.43
TOP2AP11388 RPL21P109-201ENST00000422213 475 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 RPS4XP2-201ENST00000458402 793 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 AC097462.2-201ENST00000504623 481 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 AC098799.1-201ENST00000504752 800 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.14□□□□□ -1.43
TOP2AP11388 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.14□□□□□ -1.43
TOP2AP11388 SULT1C2P2-201ENST00000562517 294 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.14□□□□□ -1.43
TOP2AP11388 AC005858.4-201ENST00000623191 700 ntBASIC6.14□□□□□ -1.43
TOP2AP11388 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.14□□□□□ -1.43
TOP2AP11388 AL645937.1-201ENST00000641739 1652 ntBASIC6.13□□□□□ -1.43
TOP2AP11388 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms