Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RPL7P53-201ENST00000421245 739 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AL138785.1-201ENST00000425821 331 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC073069.1-201ENST00000428657 441 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 FTH1P6-201ENST00000430768 320 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 KCTD9P3-201ENST00000434597 1169 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AL590762.3-201ENST00000436372 640 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 HMGB3P21-201ENST00000452483 547 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 RPL23AP23-201ENST00000452590 471 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 OR52A4P-201ENST00000472867 958 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 RN7SL271P-201ENST00000487601 295 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 USP9YP5-201ENST00000511770 630 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 IGKV2-36-201ENST00000519999 223 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC087272.1-201ENST00000523624 533 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 OR5AK3P-201ENST00000527486 1297 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 OR5BC1P-201ENST00000529327 739 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 OR5D15P-201ENST00000531671 942 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 POLR2KP1-201ENST00000553226 168 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 MIR4716-201ENST00000579628 84 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 MIR4480-201ENST00000582492 71 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AL592295.2-201ENST00000612578 206 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AL591424.2-201ENST00000617023 128 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 PWAR6-201ENST00000552334 4618 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 HMGB1P10-201ENST00000395823 563 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC097374.1-203ENST00000400783 485 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AL159169.1-201ENST00000421119 127 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 NPM1P34-201ENST00000428821 893 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 PTP4A1P3-201ENST00000433661 420 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 FTH1P16-201ENST00000435241 552 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 MTND4P15-201ENST00000437913 1033 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC097499.1-201ENST00000444277 208 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 ARL5AP2-201ENST00000444698 533 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 ARL2BPP10-201ENST00000446487 531 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC010285.3-201ENST00000511668 676 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 MTND2P31-201ENST00000512602 616 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 RNU6-1102P-201ENST00000516149 96 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 OR5AN2P-201ENST00000534535 896 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC025260.1-201ENST00000548858 430 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 OR4U1P-201ENST00000554958 912 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC106785.3-201ENST00000564064 847 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 VN1R79P-201ENST00000593540 513 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC079587.1-201ENST00000603846 277 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC018618.2-201ENST00000604770 446 ntBASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DQA1P01909 AC007423.1-201ENST00000605009 627 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms