Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 USP9YP24-201ENST00000434374 697 ntBASIC4.26□□□□□ -1.73
SSX4O60224 RAB11AP1-201ENST00000442978 646 ntBASIC4.26□□□□□ -1.73
SSX4O60224 RPL21P133-201ENST00000443666 476 ntBASIC4.26□□□□□ -1.73
SSX4O60224 USP9YP17-201ENST00000444617 696 ntBASIC4.26□□□□□ -1.73
SSX4O60224 HMGB3P6-201ENST00000444896 598 ntBASIC4.26□□□□□ -1.73
SSX4O60224 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 MRPL48P1-201ENST00000445390 636 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC092155.2-201ENST00000454675 477 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 AC010683.1-201ENST00000473673 378 ntBASIC4.26□□□□□ -1.73
SSX4O60224 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 GAPDHP39-201ENST00000481866 979 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC069528.1-202ENST00000482888 637 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC093267.1-201ENST00000489176 961 ntBASIC4.26□□□□□ -1.73
SSX4O60224 RN7SL441P-201ENST00000492388 296 ntBASIC4.26□□□□□ -1.73
SSX4O60224 RPL23AP72-201ENST00000492447 435 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC134050.1-201ENST00000495088 933 ntBASIC4.26□□□□□ -1.73
SSX4O60224 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
SSX4O60224 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.26□□□□□ -1.73
SSX4O60224 HIGD1AP6-201ENST00000521833 279 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 OR5AN2P-201ENST00000534535 896 ntBASIC4.26□□□□□ -1.73
SSX4O60224 GCSHP4-201ENST00000538792 439 ntBASIC4.26□□□□□ -1.73
SSX4O60224 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.26□□□□□ -1.73
SSX4O60224 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 MIR4716-201ENST00000579628 84 ntBASIC4.26□□□□□ -1.73
SSX4O60224 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC009237.17-201ENST00000618111 748 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC243756.2-201ENST00000618406 463 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AL121895.2-201ENST00000619558 447 ntBASIC4.26□□□□□ -1.73
SSX4O60224 MIR7154-201ENST00000620673 73 ntBASIC4.26□□□□□ -1.73
SSX4O60224 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.26□□□□□ -1.73
SSX4O60224 AC000367.1-201ENST00000452711 1766 ntBASIC4.26□□□□□ -1.73
SSX4O60224 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 AL133243.3-201ENST00000617415 3004 ntBASIC4.26□□□□□ -1.73
SSX4O60224 AC074029.4-201ENST00000624796 1859 ntBASIC4.26□□□□□ -1.73
SSX4O60224 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSX4O60224 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.26□□□□□ -1.73
SSX4O60224 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
SSX4O60224 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 AC018529.3-201ENST00000624212 2254 ntBASIC4.25□□□□□ -1.73
SSX4O60224 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 AL355852.1-201ENST00000454081 1771 ntBASIC4.25□□□□□ -1.73
SSX4O60224 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX4O60224 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 RNVU1-6-201ENST00000364688 164 ntBASIC4.25□□□□□ -1.73
SSX4O60224 RNU6-619P-201ENST00000365146 108 ntBASIC4.25□□□□□ -1.73
SSX4O60224 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 RNU6-398P-201ENST00000384143 109 ntBASIC4.25□□□□□ -1.73
SSX4O60224 RNU6-1151P-201ENST00000384684 107 ntBASIC4.25□□□□□ -1.73
SSX4O60224 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 PRRC2CP1-201ENST00000404428 159 ntBASIC4.25□□□□□ -1.73
SSX4O60224 RAB28P1-201ENST00000411517 641 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC119751.6-201ENST00000416712 186 ntBASIC4.25□□□□□ -1.73
SSX4O60224 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX4O60224 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX4O60224 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX4O60224 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX4O60224 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 MTND2P5-201ENST00000432656 1006 ntBASIC4.25□□□□□ -1.73
SSX4O60224 CEACAMP1-201ENST00000434624 1035 ntBASIC4.25□□□□□ -1.73
SSX4O60224 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX4O60224 HMGB1P48-201ENST00000446155 598 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC112492.1-201ENST00000449607 712 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC104306.1-201ENST00000449702 371 ntBASIC4.25□□□□□ -1.73
SSX4O60224 RPL23AP15-201ENST00000450202 459 ntBASIC4.25□□□□□ -1.73
SSX4O60224 ZNF886P-201ENST00000450781 723 ntBASIC4.25□□□□□ -1.73
SSX4O60224 IGHV5-78-201ENST00000450948 295 ntBASIC4.25□□□□□ -1.73
SSX4O60224 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
SSX4O60224 NDUFA5P9-201ENST00000472609 340 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.25□□□□□ -1.73
SSX4O60224 AC126121.1-201ENST00000482313 553 ntBASIC4.25□□□□□ -1.73
SSX4O60224 GAPDHP56-201ENST00000506031 988 ntBASIC4.25□□□□□ -1.73
SSX4O60224 NDUFB4P12-201ENST00000513465 390 ntBASIC4.25□□□□□ -1.73
SSX4O60224 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.25□□□□□ -1.73
SSX4O60224 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.25□□□□□ -1.73
SSX4O60224 AP006289.1-201ENST00000538089 277 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms