Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 MIR16-2-201ENST00000362117 81 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 HMGB3P18-201ENST00000406327 590 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 MIR1303-201ENST00000408625 86 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AL158825.1-201ENST00000414735 521 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 VDAC1P6-201ENST00000430062 855 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 DDX39BP2-208ENST00000453923 258 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 DHFRP3-201ENST00000455595 559 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC078857.1-201ENST00000469870 667 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 UQCRHP4-201ENST00000471686 272 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 DEFB109F-201ENST00000491870 277 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 HMGB1P21-201ENST00000502313 581 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 RN7SKP21-201ENST00000516503 220 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 RN7SKP82-201ENST00000516786 223 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 MRPL49P2-201ENST00000521066 465 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC008562.1-201ENST00000521763 330 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC067852.4-201ENST00000590314 478 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC113403.1-201ENST00000604910 193 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC005972.3-201ENST00000606304 481 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 uc_338.13-201ENST00000618243 179 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC243756.2-201ENST00000618406 463 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC005086.4-201ENST00000623065 213 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 AC005261.4-201ENST00000600047 1385 ntBASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
NPIPA2E9PIF3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AL121657.1-201ENST00000327215 531 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 IL6STP1-201ENST00000346911 1020 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RNA5SP366-201ENST00000365454 123 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RNU1-44P-201ENST00000384453 163 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RPS26P8-201ENST00000393490 348 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 MTATP6P31-201ENST00000406985 692 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RNU2-65P-201ENST00000410162 185 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RNU2-6P-201ENST00000411404 190 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RPS20P14-201ENST00000412545 360 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AL445183.3-201ENST00000414168 502 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC004448.2-201ENST00000422360 586 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RPL23AP38-201ENST00000423801 469 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC023347.2-201ENST00000433994 462 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RPL7P33-201ENST00000444159 742 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 YWHAQP9-201ENST00000445891 512 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC010469.1-201ENST00000463864 576 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 TRBV8-2-201ENST00000475637 270 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RN7SL817P-201ENST00000480777 288 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC091167.1-201ENST00000492017 396 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC092045.1-201ENST00000495716 1231 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 OR5H4P-201ENST00000510851 923 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 OR4R2P-201ENST00000530815 597 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RFPL1S-203ENST00000539579 330 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RMST_10.1-201ENST00000616309 154 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms