Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC093767.1-201ENST00000504523 156 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 MTND1P36-201ENST00000522384 936 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AP001317.1-201ENST00000531194 960 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC087894.1-201ENST00000538359 518 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC091515.1-201ENST00000548110 679 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC126177.3-201ENST00000551839 688 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC087481.2-201ENST00000565492 330 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 TVP23CP2-201ENST00000571473 623 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC090666.1-201ENST00000578241 445 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 MIR4505-201ENST00000582238 73 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC103881.1-201ENST00000603476 538 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AP003973.1-201ENST00000604639 691 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AL583856.2-201ENST00000606298 543 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AL121873.1-201ENST00000616013 524 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC009318.4-201ENST00000620496 486 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC006963.1-201ENST00000624003 1052 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 AC136428.4-201ENST00000634254 1155 ntBASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HMGB1P1B2RPK0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.64
HMGB1P1B2RPK0 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
HMGB1P1B2RPK0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
HMGB1P1B2RPK0 AC105074.1-201ENST00000623380 3095 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 RNU6-657P-201ENST00000383904 107 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 RNU6-730P-201ENST00000383954 104 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 RNA5SP129-201ENST00000410276 118 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 OR8G2P-201ENST00000412796 908 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AL391219.1-201ENST00000422570 483 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 SKP1P3-201ENST00000429280 487 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 HMGB1P12-201ENST00000438594 598 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 OR7E125P-201ENST00000443450 846 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 RPL7P52-201ENST00000449200 742 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 NPM1P13-201ENST00000452663 865 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 HIGD1AP8-201ENST00000453927 274 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC244505.3-201ENST00000454598 187 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 NECAP1P2-201ENST00000455668 727 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 GAPDHP39-201ENST00000481866 979 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC025445.1-201ENST00000502728 300 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 HMGN1P15-201ENST00000513870 295 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 IGLV3-26-201ENST00000520756 302 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AP003066.2-201ENST00000529375 555 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC092747.2-201ENST00000545069 983 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 RPL23AP87-202ENST00000573039 466 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AL512413.1-201ENST00000606489 382 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC092954.1-201ENST00000609121 445 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AL391261.4-201ENST00000616012 481 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AC090527.3-201ENST00000619041 548 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 AP000943.4-201ENST00000622912 357 ntBASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.83□□□□□ -1.64
HMGB1P1B2RPK0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HMGB1P1B2RPK0 AC109780.1-201ENST00000451768 1344 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms