Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 USP9YP7-201ENST00000436723 430 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC005154.2-201ENST00000438110 379 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 USP9YP32-201ENST00000452432 430 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 ANP32BP2-201ENST00000454525 545 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 RPL37P3-201ENST00000456825 293 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 RPL23AP14-201ENST00000468281 468 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AL161747.1-201ENST00000480068 358 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 IGKV1-32-201ENST00000519290 311 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 IGKV2-36-201ENST00000519999 223 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AL121594.4-201ENST00000556211 1196 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC104785.1-201ENST00000603220 588 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC069304.3-201ENST00000603938 1084 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AL354984.3-201ENST00000604803 325 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 AC008121.2-201ENST00000614647 523 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 ERCC6-202ENST00000374127 1782 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 GTF2H2B-203ENST00000508065 1432 ntBASIC3.19□□□□□ -1.9
RBFOX3A6NFN3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC022031.1-201ENST00000585985 2593 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC066616.2-201ENST00000559334 1481 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 MIR184-201ENST00000384962 84 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 HLFP1-201ENST00000402375 499 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 MIR1251-201ENST00000408552 70 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 RBMY2KP-201ENST00000418221 992 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AL139095.3-201ENST00000419672 1203 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AL159169.1-201ENST00000421119 127 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC105402.2-201ENST00000438503 358 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC053481.1-201ENST00000467217 306 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC110792.2-201ENST00000510278 224 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 RNU7-143P-201ENST00000516781 65 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 CDH12P4-201ENST00000517835 295 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 CDH12P3-201ENST00000517935 295 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 CDH12P1-201ENST00000518435 295 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 PTP4A1P6-201ENST00000531034 478 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 CYP2C60P-201ENST00000566088 139 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC022968.1-201ENST00000567372 442 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC091042.1-201ENST00000579213 173 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC022146.1-201ENST00000595307 847 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC073111.2-201ENST00000605657 1075 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 RNA5SP108-201ENST00000605921 117 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC023043.4-201ENST00000612081 449 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC087385.3-201ENST00000620477 187 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC091905.1-201ENST00000624400 311 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AL049536.1-201ENST00000625043 744 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 ZNF33CP-201ENST00000432492 2030 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AL049737.1-201ENST00000413920 1403 ntBASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RBFOX3A6NFN3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 AL391417.1-201ENST00000404100 426 ntBASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 RN7SKP100-201ENST00000411258 284 ntBASIC3.17□□□□□ -1.9
RBFOX3A6NFN3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms