Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 OR4A15-201ENST00000314706 1035 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 RNU1-18P-201ENST00000363062 164 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 RNU6-213P-201ENST00000384051 104 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 MIR30B-201ENST00000384850 88 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 SNORA3.3-201ENST00000408712 125 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 Z97055.1-201ENST00000419730 712 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AL035246.1-201ENST00000433554 1255 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AP000936.3-201ENST00000438127 255 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC083863.1-201ENST00000438811 231 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 RRM2P4-201ENST00000441721 562 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 MTND4LP12-201ENST00000448237 295 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 RPL7P15-201ENST00000461190 712 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AL133372.1-201ENST00000493565 745 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC092747.2-201ENST00000545069 983 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AL133457.1-201ENST00000564251 987 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC105036.1-201ENST00000566222 271 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AL133247.2-201ENST00000603236 482 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC112230.1-201ENST00000604342 547 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AL034351.1-201ENST00000605288 668 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC005344.1-201ENST00000613391 459 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC244205.2-202ENST00000635781 342 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 MIR6715B-201ENST00000637172 77 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 RPS4XP5-202ENST00000449995 1334 ntBASIC3.09□□□□□ -1.91
TCRBV4S1A1TA0A5B7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.09□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PNPT1P2-201ENST00000456768 2050 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RN7SKP156-201ENST00000410308 342 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC010740.1-201ENST00000417035 684 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC018644.1-201ENST00000429934 551 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL445584.1-201ENST00000431451 330 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 RPS17P13-201ENST00000448974 407 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC098824.1-201ENST00000453565 980 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC244505.7-201ENST00000599675 272 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC091905.1-201ENST00000624400 311 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ATE1-AS1-202ENST00000636460 506 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC233968.1-201ENST00000611212 1300 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AP004289.2-201ENST00000444413 1457 ntBASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.08□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ATP5F1P4-201ENST00000397288 746 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 ZNF602P-201ENST00000405929 924 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 MTND2P15-201ENST00000418575 892 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OR5AW1P-201ENST00000426334 1006 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 GOT2P5-201ENST00000433995 546 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC091564.1-201ENST00000464563 479 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 PAICSP4-201ENST00000517543 1253 ntBASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TCRBV4S1A1TA0A5B7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms