Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC072039.1-201ENST00000477611 581 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC025674.1-201ENST00000507074 324 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 HSPE1P23-201ENST00000509838 286 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 HMGB3P13-201ENST00000511263 607 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 SNORA70.11-201ENST00000515987 138 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 SNORA70.13-201ENST00000516116 138 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC106038.2-201ENST00000520706 568 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 ARL2BPP5-201ENST00000523141 481 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC027369.5-201ENST00000533838 755 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 GSTP1P1-201ENST00000548078 319 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC012435.1-202ENST00000568772 240 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 MIR3934-201ENST00000579806 107 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 WISP1-OT1-201ENST00000602893 642 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC011626.1-201ENST00000604710 562 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 RN7SKP299-201ENST00000606679 301 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AC092650.2-201ENST00000619984 902 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 AL353662.3-201ENST00000625131 237 ntBASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB1Q9Y5F3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.21□□□□□ -1.57
PCDHB1Q9Y5F3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB1Q9Y5F3 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.21□□□□□ -1.57
PCDHB1Q9Y5F3 AC019072.1-201ENST00000604535 1551 ntBASIC5.21□□□□□ -1.57
PCDHB1Q9Y5F3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 Y_RNA.194-201ENST00000363985 102 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MIR92A2-201ENST00000385299 75 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MT-TH-201ENST00000387441 69 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 CYB5AP4-201ENST00000396692 399 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MIR1284-201ENST00000408337 120 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 RN7SKP126-201ENST00000411143 300 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC012519.1-201ENST00000424588 610 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC104837.2-201ENST00000427236 424 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 NPM1P39-201ENST00000449818 867 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC009220.1-201ENST00000451614 275 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 RPS3AP41-201ENST00000462701 778 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 RPS29P22-201ENST00000472363 168 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 RN7SKP96-201ENST00000516948 297 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 SNORA48.10-201ENST00000516965 160 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 RN7SKP147-201ENST00000517154 244 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 NDUFA5P2-201ENST00000519723 344 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 BRD9P1-201ENST00000529855 560 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC092490.3-201ENST00000545370 572 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC007115.1-201ENST00000546853 234 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AL512347.1-201ENST00000566420 503 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AP001981.2-201ENST00000603241 418 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC008814.1-201ENST00000603797 406 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC087783.2-201ENST00000605070 562 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC002525.1-201ENST00000624392 1622 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC006484.1-201ENST00000435086 1884 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 AC092747.4-201ENST00000620519 1861 ntBASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB1Q9Y5F3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 TCP11X1-202ENST00000622971 1372 ntBASIC5.2□□□□□ -1.58
PCDHB1Q9Y5F3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms