Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AC022140.2-201ENST00000623500 188 ntBASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 AC145207.9-201ENST00000623802 325 ntBASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 OR5H6-203ENST00000642105 978 ntBASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
PCDHB4Q9Y5E5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 IGKV7-3-201ENST00000357453 298 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RNU5F-7P-201ENST00000363696 115 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RN7SKP160-201ENST00000363804 340 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 Y_RNA.303-201ENST00000364998 94 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 Y_RNA.390-201ENST00000383932 102 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RN7SKP56-201ENST00000410513 331 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RN7SKP206-201ENST00000410823 293 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 Z97055.1-201ENST00000419730 712 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RPL21P32-201ENST00000419877 477 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 OR8F1P-201ENST00000425243 930 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 CFL1P1-202ENST00000432948 411 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 SPRYD7P1-201ENST00000443861 570 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 VN1R10P-201ENST00000447106 875 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 GAPDHP14-201ENST00000450472 937 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 DNAJB5P1-201ENST00000454004 806 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RNU7-27P-201ENST00000459281 62 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AL133445.1-201ENST00000467051 452 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 HMGN2P25-201ENST00000486956 268 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RPS24P16-201ENST00000497294 392 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 SNX5P1-201ENST00000505757 1041 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 IMPA1P1-201ENST00000510718 842 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 RNA5SP373-201ENST00000517271 95 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC008126.1-201ENST00000549019 480 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 ZNF519P2-201ENST00000557032 169 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC012417.1-201ENST00000582307 1039 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC006272.2-201ENST00000594725 163 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC080013.4-201ENST00000607624 649 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC109309.2-201ENST00000612597 332 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC005332.6-201ENST00000613178 446 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AL356321.1-201ENST00000621360 228 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AL356596.1-201ENST00000624230 379 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 CYP4F35P-202ENST00000636121 390 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 MIR4302-201ENST00000638058 60 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 MKKS-204ENST00000639674 192 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 OR52B5P-202ENST00000641118 1110 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 MTND5P26-201ENST00000426018 1752 ntBASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHB4Q9Y5E5 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 OR55B1P-203ENST00000641518 2602 ntBASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHB4Q9Y5E5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms