Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 OR14L1P-202ENST00000641545 3009 ntBASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LRCH1Q9Y2L9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 YES1P1-201ENST00000418510 1628 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 RN7SKP269-201ENST00000365545 319 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 RNU6-1122P-201ENST00000384449 107 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 MIR153-1-201ENST00000384914 90 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 SNRPEP2-201ENST00000397592 279 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 RSL24D1P4-201ENST00000400938 484 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 EIF4EP1-201ENST00000422311 642 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL139148.1-201ENST00000427122 680 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 BX323845.3-201ENST00000428215 527 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL008629.1-201ENST00000438615 184 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC092427.1-201ENST00000439177 601 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 HMGB3P9-201ENST00000441799 583 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL035090.1-201ENST00000454835 332 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 HIGD1AP3-201ENST00000515857 278 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 IGLV3-30-201ENST00000524362 298 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AP003461.1-201ENST00000528866 78 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL512347.1-201ENST00000566420 503 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC012146.2-201ENST00000576545 416 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC005412.1-201ENST00000580812 1049 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 OR4G1P-201ENST00000588632 938 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL592221.1-201ENST00000605266 382 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AL008729.2-201ENST00000606393 473 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC097655.1-201ENST00000635075 318 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 AC017104.4-201ENST00000636283 1592 ntBASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LRCH1Q9Y2L9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 TLK1P1-201ENST00000456760 2440 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 TMSB4XP4-201ENST00000323496 618 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 MIR323A-201ENST00000362199 86 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 HDGFP1-201ENST00000405943 252 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 OR8G2P-201ENST00000412796 908 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 CEACAMP8-201ENST00000413902 580 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 RPS25P9-201ENST00000435591 252 ntBASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.86□□□□□ -1.63
LRCH1Q9Y2L9 AL161636.2-201ENST00000445179 927 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms