Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 MTND4P31-201ENST00000425607 1343 ntBASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
NPIPA1Q9UND3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 USP9YP4-201ENST00000424401 1745 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 MTND4P21-201ENST00000453886 1357 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RNU6-98P-201ENST00000384173 107 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 HMGB1P10-201ENST00000395823 563 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 MIR1911-201ENST00000410783 80 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC234782.4-201ENST00000417646 1048 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 MFSD13B-201ENST00000420133 1290 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RPS6P12-201ENST00000432491 726 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AL132765.1-201ENST00000434165 553 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC114495.1-201ENST00000441274 436 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RPL23AP23-201ENST00000452590 471 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RPL35AP15-201ENST00000468042 339 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC023050.1-201ENST00000498198 304 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 HMGB1P23-201ENST00000518743 568 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RPL23AP97-201ENST00000568955 471 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 PCNAP1-202ENST00000595299 752 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC018618.2-201ENST00000604770 446 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AL021997.2-201ENST00000615674 271 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 SNX18P1Y-201ENST00000616231 511 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AL645927.2-201ENST00000618350 349 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 AC112484.5-201ENST00000624189 228 ntBASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.93□□□□□ -1.78
NPIPA1Q9UND3 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RNU1-15P-201ENST00000353977 144 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AL583835.1-201ENST00000399570 407 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 UBE2V1P15-201ENST00000407776 448 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 MIR1303-201ENST00000408625 86 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RNA5SP36-201ENST00000410197 133 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RWDD4P2-201ENST00000426392 563 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RPL7P29-201ENST00000437151 728 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 HSFY6P-201ENST00000445573 403 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RPS26P28-201ENST00000470806 348 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RWDD4P1-201ENST00000488019 565 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC010374.1-201ENST00000503762 1237 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 KCTD9P2-201ENST00000512203 1013 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 RNA5SP519-201ENST00000516480 119 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 CIR1P1-201ENST00000524055 1133 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 OR8R1P-201ENST00000543943 764 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AL352979.3-201ENST00000553515 247 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC025918.2-201ENST00000558683 763 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC245389.2-201ENST00000616023 576 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC242843.1-201ENST00000618702 573 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 AC018529.3-201ENST00000624212 2254 ntBASIC3.92□□□□□ -1.78
NPIPA1Q9UND3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA1Q9UND3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA1Q9UND3 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPIPA1Q9UND3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms