Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 PTGES3P2-201ENST00000407942 482 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AL354710.1-201ENST00000453641 246 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 PLGLA-201ENST00000465668 449 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 CIR1P1-201ENST00000524055 1133 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 HMGB2P1-201ENST00000591146 634 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AP000720.1-201ENST00000625091 483 ntBASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
SHROOM4Q9ULL8 ZNF285B-201ENST00000561698 1767 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 AC092079.1-201ENST00000558620 1985 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 EED-206ENST00000527888 1422 ntTSL 2 BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 RNU6-452P-201ENST00000384406 107 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 AC096664.2-201ENST00000411843 406 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 BOLA3P4-201ENST00000418151 400 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 RWDD4P1-201ENST00000488019 565 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 OR4R2P-201ENST00000530815 597 ntBASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM4Q9ULL8 AC116667.1-201ENST00000604855 2072 ntBASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 RN7SKP156-201ENST00000410308 342 ntBASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 TBCA-203ENST00000517679 545 ntTSL 3 BASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 AC090525.3-201ENST00000605601 189 ntBASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 AP001005.3-201ENST00000622049 129 ntBASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 AC080188.3-201ENST00000624842 748 ntBASIC7.84□□□□□ -1.15
SHROOM4Q9ULL8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC009313.2-201ENST00000417893 1941 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 SYF2P2-201ENST00000417620 583 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 MTCO1P52-201ENST00000433928 531 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC092685.1-201ENST00000447960 1243 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 CREM-220ENST00000463314 964 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 RN7SL809P-201ENST00000482040 297 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 WBP1LP4-201ENST00000505043 344 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 NPM1P47-201ENST00000560843 856 ntBASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM4Q9ULL8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 DDX18P4-201ENST00000511690 1966 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 AC006011.1-201ENST00000442758 349 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 PRDX3P3-201ENST00000447765 522 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 AC078857.1-201ENST00000469870 667 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 AL139099.1-201ENST00000497398 403 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 AL358832.1-201ENST00000497800 389 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 AC079880.2-201ENST00000603790 1213 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 MTND5P1-201ENST00000445440 1375 ntBASIC7.82□□□□□ -1.16
SHROOM4Q9ULL8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RPS27P5-201ENST00000444247 244 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RPL38P1-201ENST00000460914 211 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RPS26P28-201ENST00000470806 348 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RPS4XP15-201ENST00000489210 795 ntBASIC7.81□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms