Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 SNRPFP3-201ENST00000457792 225 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 TRBVA-201ENST00000498804 316 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC093853.1-201ENST00000515689 483 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 RNU7-51P-201ENST00000516560 62 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 MTND4P7-201ENST00000523876 130 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 COX6CP5-201ENST00000527162 228 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC090651.1-201ENST00000567865 634 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC124916.2-201ENST00000604416 224 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AL035410.2-201ENST00000604963 864 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC010680.4-201ENST00000605334 543 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AL008723.3-201ENST00000608926 449 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 AC010401.2-201ENST00000575137 4934 ntBASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
LIMD1Q9UGP4 DHX40P1-201ENST00000588725 1412 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC027088.4-201ENST00000611559 1947 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC121333.1-201ENST00000567488 2709 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC016251.2-201ENST00000623393 3089 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 THAP12P4-201ENST00000528321 2266 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 SNORD113-7-201ENST00000363762 77 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 RN7SKP47-201ENST00000365347 328 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 RNU6-278P-201ENST00000390945 109 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MIR1302-3-201ENST00000408128 138 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 HMGN1P24-201ENST00000412282 298 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MTCYBP10-201ENST00000424905 650 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC234779.1-201ENST00000425910 285 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 RPS29P14-201ENST00000431518 171 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 RNU7-180P-201ENST00000459240 63 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC079804.1-201ENST00000461922 436 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 PLGLA-201ENST00000465668 449 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 RN7SL214P-201ENST00000487317 265 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 Y_RNA.654-201ENST00000497848 106 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC104109.1-201ENST00000498563 436 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC146944.3-201ENST00000509969 371 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 PTP4A1P4-201ENST00000512479 322 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MTCO2P24-201ENST00000515611 426 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AP003122.3-201ENST00000526316 255 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 DEFB109D-201ENST00000529497 240 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 IMMP1LP2-201ENST00000552954 492 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MIR4504-201ENST00000577413 92 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 uc_338.34-201ENST00000617467 174 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MIR7854-201ENST00000620068 65 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 AC002525.1-201ENST00000624392 1622 ntBASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
LIMD1Q9UGP4 NXPH1-205ENST00000602349 1953 ntBASIC7□□□□□ -1.29
LIMD1Q9UGP4 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
LIMD1Q9UGP4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7□□□□□ -1.29
LIMD1Q9UGP4 MAPK10-365ENST00000641902 3825 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms